RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 CD6P30203 668 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 WASP42768 502 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 PTGER3P43115 390 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 P2RY4P51582 365 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 ALDH3A2P51648 485 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 ZNF133P52736 654 aaPredicted RBP1.33□□□□□ -2.2
XRN1-214ENST00000498077 CHN2P52757 468 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 SLC37A1P57057 533 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 ACTBP60709 375 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 ACTG1P63261 375 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 SLC35B1P78383 322 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 EFTUD2Q15029 972 aaKnown RBP eCLIP1.33□□□□□ -2.23e-14■■■□□ 16.4
XRN1-214ENST00000498077 ACOX1Q15067 660 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 VWC2Q2TAL6 325 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 MYLK3Q32MK0 819 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 FAM26FQ5R3K3 315 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 KANK2Q63ZY3 851 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 AWAT2Q6E213 333 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 SULT6B1Q6IMI4 303 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 PDXDC1Q6P996 788 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 ULK3Q6PHR2 472 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 FAM131AQ6UXB0 335 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 GFRALQ6UXV0 394 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 DPPA3Q6W0C5 159 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 C3orf62Q6ZUJ4 267 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 ANKS3Q6ZW76 656 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 R3HCC1LQ7Z5L2 792 aaKnown RBP1.33□□□□□ -2.2
XRN1-214ENST00000498077 B3GNT8Q7Z7M8 397 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 ZBTB46Q86UZ6 589 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 OSR2Q8N2R0 312 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 CPSF7Q8N684 471 aaKnown RBP1.33□□□□□ -2.2
XRN1-214ENST00000498077 ZNF709Q8N972 641 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 CPEB3Q8NE35 698 aaKnown RBP1.33□□□□□ -2.2
XRN1-214ENST00000498077 CHPT1Q8WUD6 406 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 HPSE2Q8WWQ2 592 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 ROBO4Q8WZ75 1007 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 VOPP1Q96AW1 172 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 IGF2BP2-AS1Q96M15 143 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 ZNF385AQ96PM9 386 aaKnown RBP1.33□□□□□ -2.2
XRN1-214ENST00000498077 SMOQ99835 787 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 SH3GL3Q99963 347 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 MCMBPQ9BTE3 642 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 STMN4Q9H169 189 aaPredicted RBP1.33□□□□□ -2.2
XRN1-214ENST00000498077 DCSTAMPQ9H295 470 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 FSCN3Q9NQT6 498 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 GIMAP4Q9NUV9 329 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 IL36AQ9UHA7 158 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 FOXA2Q9Y261 457 aaPredicted RBP1.33□□□□□ -2.2
XRN1-214ENST00000498077 SAMHD1Q9Y3Z3 626 aaKnown RBP1.33□□□□□ -2.2
XRN1-214ENST00000498077 POLQO75417 2590 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 A0A088AWK7 358 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 IGKV3D-11A0A0A0MRZ8 115 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 A0A1B0GVI7 797 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 A0A1W2PRG0 241 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 TMEM89A2RUT3 159 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 SMIM30A4D0T7 59 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 A6NL46 340 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 SHISA9B4DS77 424 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 ARHGEF9O43307 516 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 SPRY1O43609 319 aaPredicted RBP1.33□□□□□ -2.2
XRN1-214ENST00000498077 CREBL2O60519 120 aaPredicted RBP1.33□□□□□ -2.2
XRN1-214ENST00000498077 SNCGO76070 127 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 ADAP00813 363 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 IGF2P01344 180 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 VTNP04004 478 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 CLPSP04118 112 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 SERPIND1P05546 499 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 H2BFMP0C1H6 154 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 ZNF888P0CJ79 500 aaPredicted RBP1.33□□□□□ -2.2
XRN1-214ENST00000498077 CEACAM1P13688 526 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 APLNRP35414 380 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 KPNA1P52294 538 aaPredicted RBP1.33□□□□□ -2.2
XRN1-214ENST00000498077 ERVPABLB-1P60509 514 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 SEMG2Q02383 582 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 NMIQ13287 307 aaPredicted RBP1.33□□□□□ -2.2
XRN1-214ENST00000498077 GAMTQ14353 236 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 ZNF846Q147U1 533 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 RTP5Q14D33 572 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 KIAA0040Q15053 153 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 TAF13Q15543 124 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 PITRM1Q5JRX3 1037 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 FAM26DQ5JW98 314 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 LIPMQ5VYY2 423 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 NCR3LG1Q68D85 454 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 CYB5R2Q6BCY4 276 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 GPR139Q6DWJ6 353 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 PRR5LQ6MZQ0 368 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 RHBDD2Q6NTF9 364 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 PLBD1Q6P4A8 553 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 C19orf48Q6RUI8 117 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 TMEM64Q6YI46 380 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 C17orf107Q6ZR85 190 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 Q6ZWC4 215 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 H1FNTQ75WM6 255 aaPredicted RBP1.33□□□□□ -2.2
XRN1-214ENST00000498077 MAMDC2Q7Z304 686 aaPredicted RBP1.33□□□□□ -2.2
XRN1-214ENST00000498077 HSD17B13Q7Z5P4 300 aaPredicted RBP1.33□□□□□ -2.2
XRN1-214ENST00000498077 BIVMQ86UB2 503 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 SKA3Q8IX90 412 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 COLGALT2Q8IYK4 626 aa1.33□□□□□ -2.2
XRN1-214ENST00000498077 KIR3DL3Q8N743 410 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms