RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 INO80CQ6PI98 192 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-227ENST00000498056 SIRT6Q8N6T7 355 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 ZNF615Q8N8J6 731 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 BRIX1Q8TDN6 353 aaKnown RBP12.6□□□□□ -0.39
CPNE1-227ENST00000498056 SLC39A3Q9BRY0 314 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 YIPF4Q9BSR8 244 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 DEFB126Q9BYW3 111 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 TRIM4Q9C037 500 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 SEMA4CQ9C0C4 833 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 WWTR1Q9GZV5 400 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 ING2Q9H160 280 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 ATP13A2Q9NQ11 1180 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 SLC25A37Q9NYZ2 338 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 VAPAQ9P0L0 249 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 SLAMF8Q9P0V8 285 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 PRODH2Q9UF12 536 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 ZMIZ1Q9ULJ6 1067 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 FAF1Q9UNN5 650 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-227ENST00000498056 PPIEQ9UNP9 301 aaKnown RBP12.6□□□□□ -0.39
CPNE1-227ENST00000498056 CFL2Q9Y281 166 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 SSUH2Q9Y2M2 353 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 DMXL2Q8TDJ6 3036 aa12.6□□□□□ -0.39
CPNE1-227ENST00000498056 A6NL46 340 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 FXYD1O00168 92 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 PRKNO60260 465 aaPredicted RBP12.59□□□□□ -0.39
CPNE1-227ENST00000498056 PSMG1O95456 288 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 C1QCP02747 245 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 HMGN2P05204 90 aaKnown RBP12.59□□□□□ -0.39
CPNE1-227ENST00000498056 ZCCHC18P0CG32 403 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 ESRRAP11474 423 aaPredicted RBP12.59□□□□□ -0.39
CPNE1-227ENST00000498056 ICAM2P13598 275 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 HOXB9P17482 250 aaPredicted RBP12.59□□□□□ -0.39
CPNE1-227ENST00000498056 PTPN6P29350 595 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 PRIM2P49643 509 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 KHKP50053 298 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 EMDP50402 254 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 GPR143P51810 404 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 MTPNP58546 118 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 FOXK2Q01167 660 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 KRT72Q14CN4 511 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 SAXO2Q658L1 398 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 FCRLBQ6BAA4 426 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 MFSD12Q6NUT3 480 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 TNFAIP8L2Q6P589 184 aaPredicted RBP12.59□□□□□ -0.39
CPNE1-227ENST00000498056 RNF130Q86XS8 419 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 MSRB3Q8IXL7 192 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 DPP10Q8N608 796 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 SLC5A8Q8N695 610 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 KDF1Q8NAX2 398 aaPredicted RBP12.59□□□□□ -0.39
CPNE1-227ENST00000498056 OR5D16Q8NGK9 328 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 DNAJB8Q8NHS0 232 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 ELP5Q8TE02 316 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 ZFP90Q8TF47 636 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 SLC9A6Q92581 669 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 CPPED1Q9BRF8 314 aaPredicted RBP12.59□□□□□ -0.39
CPNE1-227ENST00000498056 TRIM8Q9BZR9 551 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 LIN28AQ9H9Z2 209 aaKnown RBP12.59□□□□□ -0.39
CPNE1-227ENST00000498056 GID8Q9NWU2 228 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 ERVK-11Q9UQG0 969 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 PCDHB14Q9Y5E9 798 aa12.59□□□□□ -0.39
CPNE1-227ENST00000498056 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 C2orf92A0A1B0GVN3 265 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 CCT8L1PA6NM43 557 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 A8MUI8 341 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 ZFAND5O76080 213 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 KRT75O95678 551 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 KRT16P08779 473 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 ACP2P11117 423 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 CORO7P57737 925 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 GABPB1Q06547 395 aaPredicted RBP12.58□□□□□ -0.4
CPNE1-227ENST00000498056 MYBPC3Q14896 1274 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.58□□□□□ -0.4
CPNE1-227ENST00000498056 DLEU7Q6UYE1 221 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 C6orf120Q7Z4R8 191 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 GALNT16Q8N428 558 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 CDRT4Q8N9R6 151 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 ROPN1LQ96C74 230 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 LRRC58Q96CX6 371 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 NEURL3Q96EH8 262 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 GIMAP5Q96F15 307 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 C16orf58Q96GQ5 468 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 CGREF1Q99674 301 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 LHPPQ9H008 270 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 OR51I1Q9H343 314 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 SERHL2Q9H4I8 314 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 EFCAB1Q9HAE3 211 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 TPT1P8Q9HAU6 139 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 GPATCH2Q9NW75 528 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 GPR83Q9NYM4 423 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.58□□□□□ -0.4
CPNE1-227ENST00000498056 MAP10Q9P2G4 905 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 KCNMB2Q9Y691 235 aa12.58□□□□□ -0.4
CPNE1-227ENST00000498056 ACACBO00763 2458 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 CFAP47Q6ZTR5 3102 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 TRBV5-3A0A0A0MS03 114 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 CLIC1O00299 241 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 WWP2O00308 870 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 ALOX5P09917 674 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 CALB2P22676 271 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 PPIBP23284 216 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms