RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ANGPTL2Q9UKU9 493 aa5.49□□□□□ -1.53
BRCA1-224ENST00000497488 EMCNQ9ULC0 261 aa5.49□□□□□ -1.53
BRCA1-224ENST00000497488 RPH3ALQ9UNE2 315 aa5.49□□□□□ -1.53
BRCA1-224ENST00000497488 SATB2Q9UPW6 733 aa5.49□□□□□ -1.53
BRCA1-224ENST00000497488 KLHDC2Q9Y2U9 406 aa5.49□□□□□ -1.53
BRCA1-224ENST00000497488 ZNF175Q9Y473 711 aa5.49□□□□□ -1.53
BRCA1-224ENST00000497488 AFF2P51816 1311 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 ABCA3Q99758 1704 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 ALS2Q96Q42 1657 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 SBNO1A3KN83 1393 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 EIF3AQ14152 1382 aaKnown RBP5.48□□□□□ -1.53
BRCA1-224ENST00000497488 ESYT2A0FGR8 921 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 hDV102S1A0JD36 115 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 SH3PXD2BA1X283 911 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 C5orf60A6NFR6 353 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 STX7O15400 261 aaKnown RBP5.48□□□□□ -1.53
BRCA1-224ENST00000497488 RRP8O43159 456 aaKnown RBP5.48□□□□□ -1.53
BRCA1-224ENST00000497488 MLNRO43193 412 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 KRT36O76013 467 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 STK17BO94768 372 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 FGFR1OPO95684 399 aaKnown RBP5.48□□□□□ -1.53
BRCA1-224ENST00000497488 PEX11BO96011 259 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 PGK1P00558 417 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 CYP19A1P11511 503 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-224ENST00000497488 FCGR1AP12314 374 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 GP1BBP13224 206 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 NCK1P16333 377 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 NAGAP17050 411 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 GM2AP17900 193 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 POLR2CP19387 275 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-224ENST00000497488 MSR1P21757 451 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 GPX3P22352 226 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 ACKR3P25106 362 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 LMO1P25800 156 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 RBMS1P29558 406 aaKnown RBP5.48□□□□□ -1.53
BRCA1-224ENST00000497488 NAMPTP43490 491 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 AVPR1BP47901 424 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 RASSF2P50749 326 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 RAB9AP51151 201 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 SLC8A3P57103 927 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 ZP1P60852 638 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 ISL1P61371 349 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 RPS13P62277 151 aaKnown RBP5.48□□□□□ -1.53
BRCA1-224ENST00000497488 XIAPP98170 497 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 BDH1Q02338 343 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 MFGE8Q08431 387 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-224ENST00000497488 FOXI1Q12951 378 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 MFAP5Q13361 173 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 ITGA9Q13797 1035 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 PARP6Q2NL67 630 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 HNRNPA1L2Q32P51 320 aaKnown RBP5.48□□□□□ -1.53
BRCA1-224ENST00000497488 GPR33Q49SQ1 333 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 C6orf226Q5I0X4 101 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 PAPD7Q5XG87 772 aaKnown RBP5.48□□□□□ -1.53
BRCA1-224ENST00000497488 ZNF772Q68DY9 489 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-224ENST00000497488 FCRLBQ6BAA4 426 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 RNASEKQ6P5S7 137 aaKnown RBP5.48□□□□□ -1.53
BRCA1-224ENST00000497488 DEGS2Q6QHC5 323 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 DHRS11Q6UWP2 260 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 KCTD8Q6ZWB6 473 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 GLCCI1Q86VQ1 547 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 GPBP1Q86WP2 473 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 SLC38A6Q8IZM9 456 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 FAM9CQ8IZT9 166 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 GTPBP8Q8N3Z3 284 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-224ENST00000497488 SPEM1Q8N4L4 309 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 LMNTD1Q8N9Z9 388 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 CCDC197Q8NCU1 140 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 OR13F1Q8NGS4 319 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 SPATA22Q8NHS9 363 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 ST8SIA1Q92185 356 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 SLC35C1Q96A29 364 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 ACCSQ96QU6 501 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 TIMP4Q99727 224 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 CCM2Q9BSQ5 444 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 IL1RL2Q9HB29 575 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 OR6C2Q9NZP2 312 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 ZNF319Q9P2F9 582 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 DBF4Q9UBU7 674 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-224ENST00000497488 TBC1D24Q9ULP9 559 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 C15orf41Q9Y2V0 281 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 AMDHD2Q9Y303 409 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 RNF215Q9Y6U7 377 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 PPIP5K1Q6PFW1 1433 aa5.48□□□□□ -1.53
BRCA1-224ENST00000497488 POLR3AO14802 1390 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-224ENST00000497488 ZCWPW2A0A1B0GU75 182 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 A0A1B0GVL5 298 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 WASHC1A8K0Z3 465 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 C9JVG2 144 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 MGST3O14880 152 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 PRKRAO75569 313 aaKnown RBP5.47□□□□□ -1.53
BRCA1-224ENST00000497488 CAVIN2O95810 425 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 MT-ND2P03891 347 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 TFAP2AP05549 437 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 LYNP07948 512 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 UQCRBP14927 111 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 ARSBP15848 533 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 ZNF23P17027 643 aa5.47□□□□□ -1.53
BRCA1-224ENST00000497488 WT1P19544 449 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-224ENST00000497488 CYP2B6P20813 491 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms