RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	HHATL	Q9HCP6	504 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	DDIT4	Q9NX09	232 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GALP	Q9UBC7	116 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	UTS2R	Q9UKP6	389 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	FZD1	Q9UP38	647 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RREB1	Q92766	1687 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TMEM218	A2RU14	115 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RGS9	O75916	674 aa	Predicted RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GUCA1C	O95843	209 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GABRA1	P14867	456 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	HNF1A	P20823	631 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ACVR2A	P27037	513 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ABCD3	P28288	659 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CALCR	P30988	508 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GPX4	P36969	197 aa	Predicted RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	IFNGR2	P38484	337 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZNF33A	Q06730	810 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	FOXO1	Q12778	655 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	DUSP4	Q13115	394 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GBX1	Q14549	363 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MANEA	Q5SRI9	462 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PRAMEF18	Q5VWM3	479 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	DDX53	Q86TM3	631 aa	Known RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ISCA2	Q86U28	154 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	KLHDC8B	Q8IXV7	354 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CERS5	Q8N5B7	392 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	C15orf54	Q8N8G6	183 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PAQR8	Q8TEZ7	354 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CLEC4D	Q8WXI8	215 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CMTM3	Q96MX0	182 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PRR14	Q9BWN1	585 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	POLDIP3	Q9BY77	421 aa	Known RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	BARHL1	Q9BZE3	327 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MIXL1	Q9H2W2	232 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	HMX1	Q9NP08	348 aa	Predicted RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZNF302	Q9NR11	478 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ACSS1	Q9NUB1	689 aa	Predicted RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PMS2P1	A4D2B8	440 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	EFCAB7	A8K855	629 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MCRIP1	C9JLW8	97 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549		E7EQ34	232 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GOSR2	O14653	212 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	OR1I1	O60431	355 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	USP2	O75604	605 aa	Predicted RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	POMC	P01189	267 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MT-ND4L	P03901	98 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PIP	P12273	146 aa	Predicted RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GABRA5	P31644	462 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RPS10	P46783	165 aa	Known RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	NUBP1	P53384	320 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	NDUFA6	P56556	154 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	DYRK1A	Q13627	763 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CLINT1	Q14677	625 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ATXN7L3	Q14CW9	347 aa	Predicted RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PTGES3	Q15185	160 aa	Known RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TAF13	Q15543	124 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	DLEU7	Q6UYE1	221 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	LDB1	Q86U70	411 aa	Predicted RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	COMTD1	Q86VU5	262 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	AMIGO3	Q86WK7	504 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SIAH3	Q8IW03	269 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SLC35F3	Q8IY50	421 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	POMGNT2	Q8NAT1	580 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RNF149	Q8NC42	400 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RHOV	Q96L33	236 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CCNL2	Q96S94	520 aa	Predicted RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	DOHH	Q9BU89	302 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	NTMT1	Q9BV86	223 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	WDCP	Q9H6R7	721 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GOLT1B	Q9Y3E0	138 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MGAT4D	A6NG13	374 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RTCA	O00442	366 aa	Known RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	PIP5K1C	O60331	668 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SYP	P08247	313 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SNRNP70	P08621	437 aa	Known RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZNF25	P17030	456 aa	Predicted RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TAL1	P17542	331 aa	Predicted RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	C5AR1	P21730	350 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	CD81	P60033	236 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	RBM39	Q14498	530 aa	Known RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZNF235	Q14590	738 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZNHIT3	Q15649	155 aa	Predicted RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	HMGN3	Q15651	99 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MINDY4	Q4G0A6	757 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ZNF628	Q5EBL2	1059 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ACER2	Q5QJU3	275 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	OR10K2	Q6IF99	312 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	SMIM15	Q7Z3B0	74 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	IL31RA	Q8NI17	732 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	GEMIN6	Q8WXD5	167 aa	Known RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	NT5C3B	Q969T7	300 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TEX37	Q96LM6	180 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	ADGRE3	Q9BY15	652 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	TRPV2	Q9Y5S1	764 aa		7.78	□□□□□ -1.16
CRNKL1-205	ENST00000496549	MTMR11	A4FU01	709 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	GGT3P	A6NGU5	568 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CD8B2	A6NJW9	211 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PPM1D	O15297	605 aa		7.77	□□□□□ -1.17
CRNKL1-205	ENST00000496549	FMO6P	O60774	539 aa		7.77	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms