RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 LOC100653049A0A140TA62 436 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 C2orf92A0A1B0GVN3 265 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 A8MUI8 341 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 ERN1O75460 977 aaKnown RBP17.01■□□□□ 0.31
TSSC4-210ENST00000496468 KRT34O76011 436 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 ZCCHC18P0CG32 403 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 PRDX6P30041 224 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 SOX8P57073 446 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 STX5Q13190 355 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 NFYCQ13952 458 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 LASP1Q14847 261 aaKnown RBP17.01■□□□□ 0.31
TSSC4-210ENST00000496468 MYBPC3Q14896 1274 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 ZNHIT3Q15649 155 aaPredicted RBP17.01■□□□□ 0.31
TSSC4-210ENST00000496468 TBR1Q16650 682 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 GTDC1Q4AE62 458 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 CRB2Q5IJ48 1285 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 FCRLBQ6BAA4 426 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 MFSD12Q6NUT3 480 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 GPR155Q7Z3F1 870 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 RETREG3Q86VR2 466 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 CLEC4FQ8N1N0 589 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 FITM2Q8N6M3 262 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 DNAJB8Q8NHS0 232 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 JADE3Q92613 823 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 RCN3Q96D15 328 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 GIMAP5Q96F15 307 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 VSTM2LQ96N03 204 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 PAIP1Q9H074 479 aaKnown RBP17.01■□□□□ 0.31
TSSC4-210ENST00000496468 PRORYQ9H606 182 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 ERVK-11Q9UQG0 969 aa17.01■□□□□ 0.31
TSSC4-210ENST00000496468 FBP2O00757 339 aa17■□□□□ 0.31
TSSC4-210ENST00000496468 HMGN2P05204 90 aaKnown RBP17■□□□□ 0.31
TSSC4-210ENST00000496468 KRT16P08779 473 aa17■□□□□ 0.31
TSSC4-210ENST00000496468 PRIM2P49643 509 aa17■□□□□ 0.31
TSSC4-210ENST00000496468 NNATQ16517 81 aa17■□□□□ 0.31
TSSC4-210ENST00000496468 TRMT5Q32P41 509 aaKnown RBP17■□□□□ 0.31
TSSC4-210ENST00000496468 LRIF1Q5T3J3 769 aa17■□□□□ 0.31
TSSC4-210ENST00000496468 AGAP7PQ5VUJ5 663 aa17■□□□□ 0.31
TSSC4-210ENST00000496468 SAXO2Q658L1 398 aa17■□□□□ 0.31
TSSC4-210ENST00000496468 TCTN3Q6NUS6 607 aa17■□□□□ 0.31
TSSC4-210ENST00000496468 CPAMD8Q8IZJ3 1885 aa17■□□□□ 0.31
TSSC4-210ENST00000496468 LGI4Q8N135 537 aa17■□□□□ 0.31
TSSC4-210ENST00000496468 DPP10Q8N608 796 aa17■□□□□ 0.31
TSSC4-210ENST00000496468 CDRT4Q8N9R6 151 aa17■□□□□ 0.31
TSSC4-210ENST00000496468 PCYOX1LQ8NBM8 494 aa17■□□□□ 0.31
TSSC4-210ENST00000496468 C17orf47Q8NEP4 570 aa17■□□□□ 0.31
TSSC4-210ENST00000496468 FDCSPQ8NFU4 85 aa17■□□□□ 0.31
TSSC4-210ENST00000496468 FBXO30Q8TB52 745 aa17■□□□□ 0.31
TSSC4-210ENST00000496468 EXTL1Q92935 676 aa17■□□□□ 0.31
TSSC4-210ENST00000496468 NEURL3Q96EH8 262 aa17■□□□□ 0.31
TSSC4-210ENST00000496468 AGAP4Q96P64 663 aa17■□□□□ 0.31
TSSC4-210ENST00000496468 BTBD9Q96Q07 612 aa17■□□□□ 0.31
TSSC4-210ENST00000496468 NPAS2Q99743 824 aa17■□□□□ 0.31
TSSC4-210ENST00000496468 SLC6A13Q9NSD5 602 aa17■□□□□ 0.31
TSSC4-210ENST00000496468 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17■□□□□ 0.31
TSSC4-210ENST00000496468 FAF1Q9UNN5 650 aaPredicted RBP17■□□□□ 0.31
TSSC4-210ENST00000496468 FRG2CA6NGY1 282 aa16.99■□□□□ 0.31
TSSC4-210ENST00000496468 NME6O75414 186 aaPredicted RBP16.99■□□□□ 0.31
TSSC4-210ENST00000496468 CEACAM4O75871 244 aa16.99■□□□□ 0.31
TSSC4-210ENST00000496468 ALPPP05187 535 aa16.99■□□□□ 0.31
TSSC4-210ENST00000496468 HOXB9P17482 250 aaPredicted RBP16.99■□□□□ 0.31
TSSC4-210ENST00000496468 PTPN6P29350 595 aa16.99■□□□□ 0.31
TSSC4-210ENST00000496468 SOX11P35716 441 aa16.99■□□□□ 0.31
TSSC4-210ENST00000496468 POLE2P56282 527 aa16.99■□□□□ 0.31
TSSC4-210ENST00000496468 DCAF7P61962 342 aa16.99■□□□□ 0.31
TSSC4-210ENST00000496468 MEP1AQ16819 746 aa16.99■□□□□ 0.31
TSSC4-210ENST00000496468 COL28A1Q2UY09 1125 aa16.99■□□□□ 0.31
TSSC4-210ENST00000496468 ABHD17BQ5VST6 288 aa16.99■□□□□ 0.31
TSSC4-210ENST00000496468 B3GNTL1Q67FW5 361 aaPredicted RBP16.99■□□□□ 0.31
TSSC4-210ENST00000496468 H3F3CQ6NXT2 135 aa16.99■□□□□ 0.31
TSSC4-210ENST00000496468 C19orf48Q6RUI8 117 aa16.99■□□□□ 0.31
TSSC4-210ENST00000496468 C6orf120Q7Z4R8 191 aa16.99■□□□□ 0.31
TSSC4-210ENST00000496468 RPS19BP1Q86WX3 136 aaKnown RBP16.99■□□□□ 0.31
TSSC4-210ENST00000496468 ZNF441Q8N8Z8 693 aa16.99■□□□□ 0.31
TSSC4-210ENST00000496468 PSMF1Q92530 271 aa16.99■□□□□ 0.31
TSSC4-210ENST00000496468 ZNF354BQ96LW1 612 aa16.99■□□□□ 0.31
TSSC4-210ENST00000496468 PHF12Q96QT6 1004 aa16.99■□□□□ 0.31
TSSC4-210ENST00000496468 LMF2Q9BU23 707 aaKnown RBP16.99■□□□□ 0.31
TSSC4-210ENST00000496468 LIN28AQ9H9Z2 209 aaKnown RBP16.99■□□□□ 0.31
TSSC4-210ENST00000496468 IL1RL2Q9HB29 575 aa16.99■□□□□ 0.31
TSSC4-210ENST00000496468 GPATCH2Q9NW75 528 aa16.99■□□□□ 0.31
TSSC4-210ENST00000496468 ABI3Q9P2A4 366 aa16.99■□□□□ 0.31
TSSC4-210ENST00000496468 MYOTQ9UBF9 498 aa16.99■□□□□ 0.31
TSSC4-210ENST00000496468 PCDHB14Q9Y5E9 798 aa16.99■□□□□ 0.31
TSSC4-210ENST00000496468 MAP1BP46821 2468 aaKnown RBP16.98■□□□□ 0.31
TSSC4-210ENST00000496468 TMEM200CA6NKL6 621 aa16.98■□□□□ 0.31
TSSC4-210ENST00000496468 WWP2O00308 870 aa16.98■□□□□ 0.31
TSSC4-210ENST00000496468 KRT75O95678 551 aa16.98■□□□□ 0.31
TSSC4-210ENST00000496468 KHKP50053 298 aa16.98■□□□□ 0.31
TSSC4-210ENST00000496468 NR0B1P51843 470 aaKnown RBP16.98■□□□□ 0.31
TSSC4-210ENST00000496468 CORO7P57737 925 aa16.98■□□□□ 0.31
TSSC4-210ENST00000496468 MLF1P58340 268 aa16.98■□□□□ 0.31
TSSC4-210ENST00000496468 RPS26P62854 115 aaKnown RBP16.98■□□□□ 0.31
TSSC4-210ENST00000496468 KRT72Q14CN4 511 aa16.98■□□□□ 0.31
TSSC4-210ENST00000496468 ACER2Q5QJU3 275 aa16.98■□□□□ 0.31
TSSC4-210ENST00000496468 ZCCHC12Q6PEW1 402 aa16.98■□□□□ 0.31
TSSC4-210ENST00000496468 NPSR1Q6W5P4 371 aa16.98■□□□□ 0.31
TSSC4-210ENST00000496468 TRPM8Q7Z2W7 1104 aa16.98■□□□□ 0.31
TSSC4-210ENST00000496468 WDR53Q7Z5U6 358 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms