RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 C4orf32Q8N8J7 132 aa4.44□□□□□ -1.7
SSR3-208ENST00000496050 MIPOL1Q8TD10 442 aa4.44□□□□□ -1.7
SSR3-208ENST00000496050 TAF15Q92804 592 aaKnown RBP eCLIP4.44□□□□□ -1.7
SSR3-208ENST00000496050 DLX4Q92988 240 aaPredicted RBP4.44□□□□□ -1.7
SSR3-208ENST00000496050 ZNF597Q96LX8 424 aa4.44□□□□□ -1.7
SSR3-208ENST00000496050 THUMPD2Q9BTF0 503 aaKnown RBP4.44□□□□□ -1.7
SSR3-208ENST00000496050 HEXA-AS1Q9H8Q6 139 aa4.44□□□□□ -1.7
SSR3-208ENST00000496050 COG4Q9H9E3 785 aa4.44□□□□□ -1.7
SSR3-208ENST00000496050 IL1RL2Q9HB29 575 aa4.44□□□□□ -1.7
SSR3-208ENST00000496050 PURGQ9UJV8 347 aaKnown RBP4.44□□□□□ -1.7
SSR3-208ENST00000496050 DHRS7Q9Y394 339 aa4.44□□□□□ -1.7
SSR3-208ENST00000496050 IGHV3OR16-10A0A075B7F0 116 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 PEX11AO75192 247 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 PDE5AO76074 875 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 GOT2P00505 430 aaKnown RBP4.43□□□□□ -1.7
SSR3-208ENST00000496050 AK1P00568 194 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 OAS1P00973 400 aaKnown RBP4.43□□□□□ -1.7
SSR3-208ENST00000496050 NCF1P14598 390 aaPredicted RBP4.43□□□□□ -1.7
SSR3-208ENST00000496050 CYP11B1P15538 503 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 CYP2F1P24903 491 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 PGFP49763 221 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 VCPP55072 806 aaKnown RBP4.43□□□□□ -1.7
SSR3-208ENST00000496050 MS4A2Q01362 244 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 PAX8Q06710 450 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 KLHL30Q0D2K2 578 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 ZKSCAN8Q15776 578 aaPredicted RBP4.43□□□□□ -1.7
SSR3-208ENST00000496050 ADPRMQ3LIE5 342 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 BEND6Q5SZJ8 279 aaPredicted RBP4.43□□□□□ -1.7
SSR3-208ENST00000496050 REP15Q6BDI9 236 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 LRRC8BQ6P9F7 803 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 EMBQ6PCB8 327 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 ABRAXAS1Q6UWZ7 409 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 TMUB2Q71RG4 321 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 CCDC36Q8IYA8 594 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 OR52J3Q8NH60 311 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 SYAP1Q96A49 352 aaPredicted RBP4.43□□□□□ -1.7
SSR3-208ENST00000496050 RBM18Q96H35 190 aaKnown RBP4.43□□□□□ -1.7
SSR3-208ENST00000496050 PSMB7Q99436 277 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 GPA33Q99795 319 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 APOOQ9BUR5 198 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 RBM24Q9BX46 236 aaKnown RBP4.43□□□□□ -1.7
SSR3-208ENST00000496050 CARD6Q9BX69 1037 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 COQ10BQ9H8M1 238 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 SLC35D1Q9NTN3 355 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 GPR83Q9NYM4 423 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 KLRF1Q9NZS2 232 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 GHRLQ9UBU3 117 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 BLOC1S6Q9UL45 172 aa4.43□□□□□ -1.7
SSR3-208ENST00000496050 RPL37AP8A6NKH3 93 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 PDLIM1O00151 329 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 RANBP6O60518 1105 aaKnown RBP4.42□□□□□ -1.7
SSR3-208ENST00000496050 IGSF6O95976 241 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 CA3P07451 260 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 TSPAN8P19075 237 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 PAICSP22234 425 aaKnown RBP4.42□□□□□ -1.7
SSR3-208ENST00000496050 UCP1P25874 307 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 CALRP27797 417 aaKnown RBP4.42□□□□□ -1.7
SSR3-208ENST00000496050 PPIAP62937 165 aaKnown RBP4.42□□□□□ -1.7
SSR3-208ENST00000496050 MRPS6P82932 125 aaKnown RBP4.42□□□□□ -1.7
SSR3-208ENST00000496050 CD300CQ08708 224 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 RAPSNQ13702 412 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 RFTN1Q14699 578 aaPredicted RBP4.42□□□□□ -1.7
SSR3-208ENST00000496050 CD226Q15762 336 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 C9orf66Q5T8R8 295 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 ZNF497Q6ZNH5 498 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 STOX1Q6ZVD7 989 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 NET1Q7Z628 596 aaPredicted RBP4.42□□□□□ -1.7
SSR3-208ENST00000496050 LRRC49Q8IUZ0 686 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 ZNF440Q8IYI8 595 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 ABHD12Q8N2K0 398 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 ARFGAP2Q8N6H7 521 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 LHX4Q969G2 390 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 BIRC7Q96CA5 298 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 TSGA13Q96PP4 275 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 FAM173AQ9BQD7 235 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 ST6GALNAC5Q9BVH7 336 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 KRTAP9-8Q9BYQ0 159 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 TRPV5Q9NQA5 729 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 ATP6V1HQ9UI12 483 aa4.42□□□□□ -1.7
SSR3-208ENST00000496050 MRPL11Q9Y3B7 192 aaKnown RBP4.42□□□□□ -1.7
SSR3-208ENST00000496050 TTC26A0AVF1 554 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 LRIT2A6NDA9 550 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 WASH3PC4AMC7 463 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 CHADO15335 359 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 TYROBPO43914 113 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 MT-ND1P03886 318 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 KRT6BP04259 564 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 SNRPCP09234 159 aaKnown RBP4.41□□□□□ -1.7
SSR3-208ENST00000496050 ANXA4P09525 319 aaPredicted RBP4.41□□□□□ -1.7
SSR3-208ENST00000496050 HOXB7P09629 217 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 GSTT2P0CG29 244 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 GSTT2BP0CG30 244 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 CALCBP10092 127 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 ACAA2P42765 397 aaKnown RBP4.41□□□□□ -1.7
SSR3-208ENST00000496050 KRT6CP48668 564 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 TRPC1P48995 793 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 PRELPP51888 382 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 NAPAP54920 295 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 ARMCX5Q6P1M9 558 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 WASH2PQ6VEQ5 465 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms