RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 C6orf136Q5SQH8 315 aa11.4□□□□□ -0.58
MRPL55-233ENST00000495899 GK5Q6ZS86 529 aa11.4□□□□□ -0.58
MRPL55-233ENST00000495899 R3HCC1LQ7Z5L2 792 aaKnown RBP11.4□□□□□ -0.58
MRPL55-233ENST00000495899 OR2M7Q8NG81 312 aa11.4□□□□□ -0.58
MRPL55-233ENST00000495899 OR52R1Q8NGF1 315 aa11.4□□□□□ -0.58
MRPL55-233ENST00000495899 OR9A2Q8NGT5 310 aa11.4□□□□□ -0.58
MRPL55-233ENST00000495899 RAB3IL1Q8TBN0 382 aa11.4□□□□□ -0.58
MRPL55-233ENST00000495899 ZBTB9Q96C00 473 aa11.4□□□□□ -0.58
MRPL55-233ENST00000495899 HSPBAP1Q96EW2 488 aa11.4□□□□□ -0.58
MRPL55-233ENST00000495899 LCORQ96JN0 433 aaPredicted RBP11.4□□□□□ -0.58
MRPL55-233ENST00000495899 PAIP2Q9BPZ3 127 aaKnown RBP11.4□□□□□ -0.58
MRPL55-233ENST00000495899 REEP4Q9H6H4 257 aa11.4□□□□□ -0.58
MRPL55-233ENST00000495899 DEPPQ9NTK1 212 aa11.4□□□□□ -0.58
MRPL55-233ENST00000495899 ARGLU1Q9NWB6 273 aaPredicted RBP11.4□□□□□ -0.58
MRPL55-233ENST00000495899 NKIRAS1Q9NYS0 192 aa11.4□□□□□ -0.58
MRPL55-233ENST00000495899 OSGIN2Q9Y236 505 aa11.4□□□□□ -0.58
MRPL55-233ENST00000495899 SLC5A6Q9Y289 635 aa11.4□□□□□ -0.58
MRPL55-233ENST00000495899 A0A1B0GUH1 482 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 NPIPA5E9PKD4 350 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 J3QL48 77 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 TO15178 435 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 PEX11AO75192 247 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 LYPLA1O75608 230 aaPredicted RBP11.39□□□□□ -0.59
MRPL55-233ENST00000495899 JUNP05412 331 aaKnown RBP11.39□□□□□ -0.59
MRPL55-233ENST00000495899 PRPS2P11908 318 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 BGNP21810 368 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 RPL3P39023 403 aaKnown RBP11.39□□□□□ -0.59
MRPL55-233ENST00000495899 NCBP2P52298 156 aaKnown RBP eCLIP11.39□□□□□ -0.59
MRPL55-233ENST00000495899 WDR4P57081 412 aaKnown RBP11.39□□□□□ -0.59
MRPL55-233ENST00000495899 GPR85P60893 370 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 RPP38P78345 283 aaKnown RBP11.39□□□□□ -0.59
MRPL55-233ENST00000495899 MRPS35P82673 323 aaKnown RBP11.39□□□□□ -0.59
MRPL55-233ENST00000495899 DUSP8Q13202 625 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 MAD2L1Q13257 205 aaPredicted RBP11.39□□□□□ -0.59
MRPL55-233ENST00000495899 PDE7AQ13946 482 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 EXOSC7Q15024 291 aaKnown RBP11.39□□□□□ -0.59
MRPL55-233ENST00000495899 PRSS53Q2L4Q9 553 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 HYAL4Q2M3T9 481 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 C4orf17Q53FE4 359 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 OXLD1Q5BKU9 147 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 RNFT1Q5M7Z0 435 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 TBCELQ5QJ74 424 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 AGBL2Q5U5Z8 902 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 FAM47EQ6ZV65 393 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 HDXQ7Z353 690 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 TRIM42Q8IWZ5 723 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 LRRC34Q8IZ02 419 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 FBXW8Q8N3Y1 598 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 ZNF781Q8N8C0 355 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 ANKRD42Q8N9B4 389 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 RELTQ969Z4 430 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 PPCDCQ96CD2 204 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 TUBGCP3Q96CW5 907 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 C3orf30Q96M34 536 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 AMDHD1Q96NU7 426 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 TSSK3Q96PN8 268 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 SORT1Q99523 831 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 C20orf27Q9GZN8 174 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 TAS2R9Q9NYW1 312 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 BAIAP2L1Q9UHR4 511 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 NPIPA1Q9UND3 350 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 GPR55Q9Y2T6 319 aaPredicted RBP11.39□□□□□ -0.59
MRPL55-233ENST00000495899 SHANK1Q9Y566 2161 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 CHCHD2Q9Y6H1 151 aaPredicted RBP11.39□□□□□ -0.59
MRPL55-233ENST00000495899 RELNP78509 3460 aa11.39□□□□□ -0.59
MRPL55-233ENST00000495899 ATP6AP2A0A1C7CYW4 349 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 WIPF3A6NGB9 483 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 FRG2CA6NGY1 282 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 ACOT7O00154 380 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 TFECO14948 347 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-233ENST00000495899 COQ9O75208 318 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 SEMA7AO75326 666 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 SKAP2O75563 359 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-233ENST00000495899 ATP6AP2O75787 350 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 GLSO94925 669 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-233ENST00000495899 ZIC2O95409 532 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-233ENST00000495899 CCL3P10147 92 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 ABCD3P28288 659 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 PTGER1P34995 402 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 KCNK10P57789 538 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 EMX2Q04743 252 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 SRSF11Q05519 484 aaKnown RBP11.38□□□□□ -0.59
MRPL55-233ENST00000495899 BST1Q10588 318 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 FOXO1Q12778 655 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 RPS6KA2Q15349 733 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 ATG16L1Q676U5 607 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 NUP54Q7Z3B4 507 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 SLC22A16Q86VW1 577 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 GHDCQ8N2G8 530 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 OR2L13Q8N349 312 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 NATD1Q8N6N6 113 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 FNDC5Q8NAU1 212 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 SIMC1Q8NDZ2 872 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 FAM13CQ8NE31 585 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 OR7G2Q8NG99 324 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 SSC4DQ8WTU2 575 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 KAT2AQ92830 837 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 ELP4Q96EB1 424 aa11.38□□□□□ -0.59
MRPL55-233ENST00000495899 ZBED6CLQ96FA7 236 aaPredicted RBP11.38□□□□□ -0.59
MRPL55-233ENST00000495899 BTBD9Q96Q07 612 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms