RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 DCST1Q5T197 706 aa21.2■□□□□ 0.98
COL27A1-208ENST00000494780 UBAP2Q5T6F2 1119 aaKnown RBP21.2■□□□□ 0.98
COL27A1-208ENST00000494780 TAOK1Q7L7X3 1001 aa21.2■□□□□ 0.98
COL27A1-208ENST00000494780 FAM83FQ8NEG4 500 aaPredicted RBP21.2■□□□□ 0.98
COL27A1-208ENST00000494780 LCORQ96JN0 433 aaPredicted RBP21.2■□□□□ 0.98
COL27A1-208ENST00000494780 LRRC1Q9BTT6 524 aa21.2■□□□□ 0.98
COL27A1-208ENST00000494780 ITPAQ9BY32 194 aa21.2■□□□□ 0.98
COL27A1-208ENST00000494780 EPB41L4BQ9H329 900 aa21.2■□□□□ 0.98
COL27A1-208ENST00000494780 BRF2Q9HAW0 419 aa21.2■□□□□ 0.98
COL27A1-208ENST00000494780 BCAP29Q9UHQ4 241 aa21.2■□□□□ 0.98
COL27A1-208ENST00000494780 PSME2Q9UL46 239 aa21.2■□□□□ 0.98
COL27A1-208ENST00000494780 PLEKHA6Q9Y2H5 1048 aa21.2■□□□□ 0.98
COL27A1-208ENST00000494780 TUBAL3A6NHL2 446 aa21.19■□□□□ 0.98
COL27A1-208ENST00000494780 SNPHO15079 494 aa21.19■□□□□ 0.98
COL27A1-208ENST00000494780 DIAPH2O60879 1101 aa21.19■□□□□ 0.98
COL27A1-208ENST00000494780 ERAL1O75616 437 aaKnown RBP21.19■□□□□ 0.98
COL27A1-208ENST00000494780 IL18BPO95998 194 aa21.19■□□□□ 0.98
COL27A1-208ENST00000494780 OTCP00480 354 aa21.19■□□□□ 0.98
COL27A1-208ENST00000494780 GCKP35557 465 aa21.19■□□□□ 0.98
COL27A1-208ENST00000494780 FEN1P39748 380 aaKnown RBP21.19■□□□□ 0.98
COL27A1-208ENST00000494780 NAGLUP54802 743 aa21.19■□□□□ 0.98
COL27A1-208ENST00000494780 DCAF7P61962 342 aa21.19■□□□□ 0.98
COL27A1-208ENST00000494780 PPP2R2AP63151 447 aa21.19■□□□□ 0.98
COL27A1-208ENST00000494780 GALNT1Q10472 559 aaPredicted RBP21.19■□□□□ 0.98
COL27A1-208ENST00000494780 RCAN2Q14206 197 aa21.19■□□□□ 0.98
COL27A1-208ENST00000494780 CEBPEQ15744 281 aa21.19■□□□□ 0.98
COL27A1-208ENST00000494780 NNATQ16517 81 aa21.19■□□□□ 0.98
COL27A1-208ENST00000494780 ZPLD1Q8TCW7 415 aa21.19■□□□□ 0.98
COL27A1-208ENST00000494780 SELENOMQ8WWX9 145 aa21.19■□□□□ 0.98
COL27A1-208ENST00000494780 TM4SF18Q96CE8 201 aa21.19■□□□□ 0.98
COL27A1-208ENST00000494780 CTHRC1Q96CG8 243 aa21.19■□□□□ 0.98
COL27A1-208ENST00000494780 OMA1Q96E52 524 aa21.19■□□□□ 0.98
COL27A1-208ENST00000494780 NODALQ96S42 347 aa21.19■□□□□ 0.98
COL27A1-208ENST00000494780 MRPL57Q9BQC6 102 aaKnown RBP21.19■□□□□ 0.98
COL27A1-208ENST00000494780 OSBPL11Q9BXB4 747 aa21.19■□□□□ 0.98
COL27A1-208ENST00000494780 FARSBQ9NSD9 589 aaKnown RBP21.19■□□□□ 0.98
COL27A1-208ENST00000494780 NMRK1Q9NWW6 199 aa21.19■□□□□ 0.98
COL27A1-208ENST00000494780 SNX6Q9UNH7 406 aa21.19■□□□□ 0.98
COL27A1-208ENST00000494780 ICOSLGO75144 302 aa21.18■□□□□ 0.98
COL27A1-208ENST00000494780 PDYNP01213 254 aa21.18■□□□□ 0.98
COL27A1-208ENST00000494780 EPXP11678 715 aa21.18■□□□□ 0.98
COL27A1-208ENST00000494780 TRA2BP62995 288 aaKnown RBP21.18■□□□□ 0.98
COL27A1-208ENST00000494780 SORDQ00796 357 aa21.18■□□□□ 0.98
COL27A1-208ENST00000494780 PLCXD2Q0VAA5 305 aa21.18■□□□□ 0.98
COL27A1-208ENST00000494780 EXOSC7Q15024 291 aaKnown RBP21.18■□□□□ 0.98
COL27A1-208ENST00000494780 CAMKMTQ7Z624 323 aa21.18■□□□□ 0.98
COL27A1-208ENST00000494780 YRDCQ86U90 279 aaKnown RBP21.18■□□□□ 0.98
COL27A1-208ENST00000494780 ZNF483Q8TF39 744 aaPredicted RBP21.18■□□□□ 0.98
COL27A1-208ENST00000494780 KLHL29Q96CT2 875 aa21.18■□□□□ 0.98
COL27A1-208ENST00000494780 ALPK1Q96QP1 1244 aa21.18■□□□□ 0.98
COL27A1-208ENST00000494780 FAIM2Q9BWQ8 316 aa21.18■□□□□ 0.98
COL27A1-208ENST00000494780 JKAMPQ9P055 326 aa21.18■□□□□ 0.98
COL27A1-208ENST00000494780 PRODH2Q9UF12 536 aa21.18■□□□□ 0.98
COL27A1-208ENST00000494780 ABCA4P78363 2273 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 A0A1B0GTL3 188 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 CBR3O75828 277 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 CBX7O95931 251 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 CYP4B1P13584 511 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 CPN1P15169 458 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 KLK2P20151 261 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 DRD5P21918 477 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 SOX18P35713 384 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 PTGDSP41222 190 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 PPICP45877 212 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 DESI1Q6ICB0 168 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 LETMD1Q6P1Q0 360 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 MMP21Q8N119 569 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 C17orf53Q8N3J3 647 aaPredicted RBP21.17■□□□□ 0.98
COL27A1-208ENST00000494780 ADCY4Q8NFM4 1077 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 OR52R1Q8NGF1 315 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 MBD6Q96DN6 1003 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 PAFAH2Q99487 392 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 C1QTNF3Q9BXJ4 246 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 TSPYL1Q9H0U9 437 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 MRPL46Q9H2W6 279 aaKnown RBP21.17■□□□□ 0.98
COL27A1-208ENST00000494780 CDC42EP4Q9H3Q1 356 aaKnown RBP21.17■□□□□ 0.98
COL27A1-208ENST00000494780 KLRF1Q9NZS2 232 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 EXO1Q9UQ84 846 aaKnown RBP21.17■□□□□ 0.98
COL27A1-208ENST00000494780 PLLPQ9Y342 182 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 ZNF780BQ9Y6R6 833 aa21.17■□□□□ 0.98
COL27A1-208ENST00000494780 KIAA1549Q9HCM3 1950 aa21.16■□□□□ 0.98
COL27A1-208ENST00000494780 EEF1E1-BLOC1S5C9J1V9 151 aa21.16■□□□□ 0.98
COL27A1-208ENST00000494780 TO15178 435 aa21.16■□□□□ 0.98
COL27A1-208ENST00000494780 EEF1E1O43324 174 aaKnown RBP21.16■□□□□ 0.98
COL27A1-208ENST00000494780 GOSR1O95249 250 aa21.16■□□□□ 0.98
COL27A1-208ENST00000494780 CNTFP26441 200 aa21.16■□□□□ 0.98
COL27A1-208ENST00000494780 AGFG1P52594 562 aaKnown RBP21.16■□□□□ 0.98
COL27A1-208ENST00000494780 DGKQP52824 942 aa21.16■□□□□ 0.98
COL27A1-208ENST00000494780 TRMT12Q53H54 448 aaKnown RBP21.16■□□□□ 0.98
COL27A1-208ENST00000494780 PAMR1Q6UXH9 720 aa21.16■□□□□ 0.98
COL27A1-208ENST00000494780 RPS27LQ71UM5 84 aaKnown RBP21.16■□□□□ 0.98
COL27A1-208ENST00000494780 C9orf106Q8NAJ2 232 aa21.16■□□□□ 0.98
COL27A1-208ENST00000494780 SIMC1Q8NDZ2 872 aa21.16■□□□□ 0.98
COL27A1-208ENST00000494780 POM121Q96HA1 1249 aa21.16■□□□□ 0.98
COL27A1-208ENST00000494780 ZNF681Q96N22 645 aa21.16■□□□□ 0.98
COL27A1-208ENST00000494780 OR2B2Q9GZK3 357 aa21.16■□□□□ 0.98
COL27A1-208ENST00000494780 GALNT9Q9HCQ5 603 aa21.16■□□□□ 0.98
COL27A1-208ENST00000494780 SERHLQ9NQF3 203 aa21.16■□□□□ 0.98
COL27A1-208ENST00000494780 TRPS1Q9UHF7 1281 aa21.16■□□□□ 0.98
COL27A1-208ENST00000494780 MAPRE3Q9UPY8 281 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms