RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 ERVK-19Q9WJR5 959 aa12.19□□□□□ -0.46
ERCC3-209ENST00000494464 WASHC1A8K0Z3 465 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 PGRMC2O15173 223 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 GSC2O15499 205 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 NADKO95544 446 aaPredicted RBP12.18□□□□□ -0.46
ERCC3-209ENST00000494464 CLPSP04118 112 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 HMOX2P30519 316 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 SLC37A1P57057 533 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 GPR85P60893 370 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 TRA2BP62995 288 aaKnown RBP12.18□□□□□ -0.46
ERCC3-209ENST00000494464 SQLEQ14534 574 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 EBPQ15125 230 aaKnown RBP12.18□□□□□ -0.46
ERCC3-209ENST00000494464 C3AR1Q16581 482 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 PIGGQ5H8A4 983 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 TCHHL1Q5QJ38 904 aaPredicted RBP12.18□□□□□ -0.46
ERCC3-209ENST00000494464 CLEC6AQ6EIG7 209 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 SLC48A1Q6P1K1 146 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 LARP4Q71RC2 724 aaKnown RBP eCLIP12.18□□□□□ -0.46
ERCC3-209ENST00000494464 GALNT12Q8IXK2 581 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 DND1Q8IYX4 353 aaKnown RBP12.18□□□□□ -0.46
ERCC3-209ENST00000494464 RBM15BQ8NDT2 890 aaKnown RBP12.18□□□□□ -0.46
ERCC3-209ENST00000494464 OR2M7Q8NG81 312 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 OR4K14Q8NGD5 310 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 TWIST2Q8WVJ9 160 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 UCN3Q969E3 161 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 CCDC120Q96HB5 630 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 HBEGFQ99075 208 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 WWTR1Q9GZV5 400 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 CXorf21Q9HAI6 301 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 PFDN4Q9NQP4 134 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 PLSCR2Q9NRY7 297 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 VPS29Q9UBQ0 182 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 PCDHA9Q9Y5H5 950 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 DNAJC15Q9Y5T4 150 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 NCOA6Q14686 2063 aaPredicted RBP12.18□□□□□ -0.46
ERCC3-209ENST00000494464 MAST4O15021 2626 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 A0A1W2PS29 197 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 B2RBV5 119 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 ACOT7O00154 380 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 CCL21O00585 134 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 ULK1O75385 1050 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 UROSP10746 265 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 COX4I1P13073 169 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 ABOP16442 354 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 CPOXP36551 454 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 CPA2P48052 419 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 FUT7Q11130 342 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 ZNF267Q14586 743 aaPredicted RBP12.18□□□□□ -0.46
ERCC3-209ENST00000494464 ZNF791Q3KP31 576 aaPredicted RBP12.18□□□□□ -0.46
ERCC3-209ENST00000494464 CMPK2Q5EBM0 449 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 NXNQ6DKJ4 435 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 HIST2H2BCQ6DN03 193 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 LYPD8Q6UX82 237 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 RPTNQ6XPR3 784 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 GK5Q6ZS86 529 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 RNF165Q6ZSG1 346 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 C1orf52Q8N6N3 182 aaKnown RBP12.18□□□□□ -0.46
ERCC3-209ENST00000494464 FAM13CQ8NE31 585 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 RP9Q8TA86 221 aaKnown RBP12.18□□□□□ -0.46
ERCC3-209ENST00000494464 METTL6Q8TCB7 284 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 MCUR1Q96AQ8 359 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 TM4SF18Q96CE8 201 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 SPACA9Q96E40 222 aaPredicted RBP12.18□□□□□ -0.46
ERCC3-209ENST00000494464 PPP1R36Q96LQ0 422 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 SH2D2AQ9NP31 389 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 SACM1LQ9NTJ5 587 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 MCM8Q9UJA3 840 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 TINAGQ9UJW2 476 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 CES1P1Q9UKY3 287 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 FIS1Q9Y3D6 152 aa12.18□□□□□ -0.46
ERCC3-209ENST00000494464 A0A0G2JMM0 328 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 A0A1W2PPB8 328 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 A0A1W2PRS3 328 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 SERTM1A2A2V5 107 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 KIR3DP1A8MWS1 328 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 PIP5K1BO14986 540 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 HS6ST1O60243 411 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 GLSO94925 669 aaPredicted RBP12.17□□□□□ -0.46
ERCC3-209ENST00000494464 ATP6V1G2O95670 118 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 CHEK2O96017 543 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 ATP1B1P05026 303 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 FBXO45P0C2W1 286 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 CCL3P10147 92 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 CPMP14384 443 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 PTGER1P34995 402 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 RFC3P40938 356 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 MRPL19P49406 292 aaKnown RBP12.17□□□□□ -0.46
ERCC3-209ENST00000494464 HTR6P50406 440 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 XKP51811 444 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 HSF1Q00613 529 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 MAPRE2Q15555 327 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 ZNF750Q32MQ0 723 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 SPIN4Q56A73 249 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 XKR7Q5GH72 579 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 C6orf163Q5TEZ5 329 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 FAM219BQ5XKK7 198 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 OGFOD2Q6N063 350 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 PACS2Q86VP3 889 aa12.17□□□□□ -0.46
ERCC3-209ENST00000494464 ZNF808Q8N4W9 903 aaPredicted RBP12.17□□□□□ -0.46
ERCC3-209ENST00000494464 ZNF441Q8N8Z8 693 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms