RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 SLC15A4Q8N697 577 aa9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 ZNF615Q8N8J6 731 aa9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 ST6GALNAC3Q8NDV1 305 aa9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 PSD4Q8NDX1 1056 aa9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 SIMC1Q8NDZ2 872 aa9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 DNAJB8Q8NHS0 232 aa9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 C16orf52Q8NHV5 167 aa9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 DYDC1Q8WWB3 177 aa9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 SORT1Q99523 831 aa9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 ITPAQ9BY32 194 aa9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 NUF2Q9BZD4 464 aa9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 REEP4Q9H6H4 257 aa9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 MANSC1Q9H8J5 431 aa9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 TRIM45Q9H8W5 580 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 ANKRA2Q9H9E1 313 aa9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 PNPOQ9NVS9 261 aa9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 SEC14L3Q9UDX4 400 aa9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 MARCOQ9UEW3 520 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 PRODH2Q9UF12 536 aa9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 NPIPA1Q9UND3 350 aa9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 EIF3LQ9Y262 564 aaKnown RBP9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 WBP11Q9Y2W2 641 aaKnown RBP9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 PCDHGB6Q9Y5F9 930 aa9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 NF1P21359 2839 aa9.61□□□□□ -0.87
TRAPPC12-222ENST00000493792 DIDO1Q9BTC0 2240 aaKnown RBP9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 CAPN14A8MX76 684 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 TFECO14948 347 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 ZNF354AO60765 605 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 NME6O75414 186 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 BCAS2O75934 225 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 UNC5CO95185 931 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 NADKO95544 446 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 CBX7O95931 251 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 PRPS2P11908 318 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 EDN3P14138 238 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 DDX5P17844 614 aaKnown RBP9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 EFNA1P20827 205 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 S1PR1P21453 382 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 GPX3P22352 226 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 MST1P26927 711 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 SLC18A1P54219 525 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 KCNK10P57789 538 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 MGAT2Q10469 447 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 ZNF155Q12901 538 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 MAD2L1Q13257 205 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 PRSS53Q2L4Q9 553 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 TTMPQ5BVD1 217 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 ZNF628Q5EBL2 1059 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 PRAMEF20Q5VT98 475 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 TMEM107Q6UX40 140 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 R3HCC1LQ7Z5L2 792 aaKnown RBP9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 ZFP28Q8NHY6 868 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 ZNF675Q8TD23 568 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 TP53INP1Q96A56 240 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 CIDECQ96AQ7 238 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 SPACA9Q96E40 222 aaPredicted RBP9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 FCRL1Q96LA6 429 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 SGCZQ96LD1 299 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 FRMD6Q96NE9 622 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 NXF5Q9H1B4 397 aaKnown RBP9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 ACBD3Q9H3P7 528 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 VIPAS39Q9H9C1 493 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 SACM1LQ9NTJ5 587 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 DDX18Q9NVP1 670 aaKnown RBP9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 THAP1Q9NVV9 213 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 EXO1Q9UQ84 846 aaKnown RBP9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 OSGIN2Q9Y236 505 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 NPFFR2Q9Y5X5 522 aa9.6□□□□□ -0.87
TRAPPC12-222ENST00000493792 FAM166BA8MTA8 275 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 MYO1GB0I1T2 1018 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 HMGB1P1B2RPK0 211 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 TP53I11O14683 189 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 LRRTM2O43300 516 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 CDC40O60508 579 aaKnown RBP eCLIP9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 COQ9O75208 318 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 CCL3P10147 92 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 CNR1P21554 472 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 KRT20P35900 424 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 PIGAP37287 484 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 RPL3P39023 403 aaKnown RBP9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 MC3RP41968 323 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 DNASE1L1P49184 302 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 TMED10P49755 219 aaKnown RBP9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 PRKAG1P54619 331 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 MANFP55145 182 aaKnown RBP9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 KCNJ2P63252 427 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 PLCXD2Q0VAA5 305 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 DUSP8Q13202 625 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 PTGR1Q14914 329 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 ZNF791Q3KP31 576 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 ZNF385BQ569K4 471 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 SLC22A10Q63ZE4 541 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 NXNQ6DKJ4 435 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 GK5Q6ZS86 529 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 ZNF551Q7Z340 670 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 GOLM1Q8NBJ4 401 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 POGLUT1Q8NBL1 392 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 OR2M7Q8NG81 312 aa9.59□□□□□ -0.87
TRAPPC12-222ENST00000493792 OR7G2Q8NG99 324 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms