RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 SIRT3Q9NTG7 399 aaPredicted RBP11.57□□□□□ -0.56
SNX17-208ENST00000493711 MAP10Q9P2G4 905 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.57□□□□□ -0.56
SNX17-208ENST00000493711 BCAP29Q9UHQ4 241 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 FAF1Q9UNN5 650 aaPredicted RBP11.57□□□□□ -0.56
SNX17-208ENST00000493711 ERVK-19Q9WJR5 959 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 MRPS18BQ9Y676 258 aaKnown RBP11.57□□□□□ -0.56
SNX17-208ENST00000493711 FREM2Q5SZK8 3169 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 IGF2RP11717 2491 aa11.57□□□□□ -0.56
SNX17-208ENST00000493711 RNF103-CHMP3A0A140T963 221 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 EFSO43281 561 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 ZFAND5O76080 213 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 PSMG1O95456 288 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 CBX7O95931 251 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 PTPN6P29350 595 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 NUDT2P50583 147 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 GPR143P51810 404 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 SLC37A1P57057 533 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 MRPS35P82673 323 aaKnown RBP11.56□□□□□ -0.56
SNX17-208ENST00000493711 MXRA7P84157 204 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 MYBPC3Q14896 1274 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 DCAF10Q5QP82 559 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 FAM69BQ5VUD6 431 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 HLA-DQA1Q5Y7H0 255 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 SAXO2Q658L1 398 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 C16orf89Q6UX73 402 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 DLEU7Q6UYE1 221 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 DGAT2L6Q6ZPD8 337 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 LIAT1Q6ZQX7 453 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 CCDC121Q6ZUS5 278 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 SZRD1Q7Z422 152 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 C6orf120Q7Z4R8 191 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 SPACA3Q8IXA5 215 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 ZNF615Q8N8J6 731 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 CDRT4Q8N9R6 151 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 C17orf47Q8NEP4 570 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 OR52R1Q8NGF1 315 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 OR8J3Q8NGG0 315 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 MIPOL1Q8TD10 442 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 ZNF721Q8TF20 911 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 NCLNQ969V3 563 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 LRRC58Q96CX6 371 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 NPAS2Q99743 824 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 TPT1P8Q9HAU6 139 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 ZNF160Q9HCG1 818 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 GIN1Q9NXP7 522 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 PCDHB14Q9Y5E9 798 aa11.56□□□□□ -0.56
SNX17-208ENST00000493711 HEMK1Q9Y5R4 338 aaPredicted RBP11.56□□□□□ -0.56
SNX17-208ENST00000493711 GCN1Q92616 2671 aaKnown RBP11.55□□□□□ -0.56
SNX17-208ENST00000493711 A0A087WV48 116 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 TRBV5-3A0A0A0MS03 114 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 IGHV3-20A0A0C4DH32 117 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 TAF4O00268 1085 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 CLIC1O00299 241 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 CDK2AP1O14519 115 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 NKX2-8O15522 239 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 ASNA1O43681 348 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 UBOX5O94941 541 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 GSNP06396 782 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 CT62P0C5K7 136 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 HOXB9P17482 250 aaPredicted RBP11.55□□□□□ -0.56
SNX17-208ENST00000493711 SSTR4P31391 388 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 CDKN2CP42773 168 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 PPICP45877 212 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 KHKP50053 298 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 PRKAG1P54619 331 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 SOX8P57073 446 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 TMPRSS3P57727 454 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 GUCA2AQ02747 115 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 BNIP1Q12981 228 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 FADDQ13158 208 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 KIF26BQ2KJY2 2108 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 SPATS1Q496A3 300 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 RUNDC3AQ59EK9 446 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 MFSD12Q6NUT3 480 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 PROSER1Q86XN7 944 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 LGI4Q8N135 537 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 SLC5A8Q8N695 610 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 APCDD1LQ8NCL9 501 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 OR52N2Q8NGI0 321 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 NUBPLQ8TB37 319 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 ELP5Q8TE02 316 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 ZFP90Q8TF47 636 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 ZCCHC14Q8WYQ9 949 aaKnown RBP11.55□□□□□ -0.56
SNX17-208ENST00000493711 TP53INP1Q96A56 240 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 MAGED4Q96JG8 741 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 SLC35G5Q96KT7 338 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 ANKRD27Q96NW4 1050 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 NUDT9Q9BW91 350 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 ACTRT3Q9BYD9 372 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 DEFB126Q9BYW3 111 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 TRIM4Q9C037 500 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 C1orf21Q9H246 121 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 EPS8L2Q9H6S3 715 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 TEKT2Q9UIF3 430 aa11.55□□□□□ -0.56
SNX17-208ENST00000493711 ITPR1Q14643 2758 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 TRBV11-1A0A0K0K1C0 115 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 C2orf92A0A1B0GVN3 265 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 TMEM247A6NEH6 219 aa11.54□□□□□ -0.56
SNX17-208ENST00000493711 B2RBV5 119 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms