RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 SH3BP4Q9P0V3 963 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 SUCOQ9UBS9 1254 aaKnown RBP6.43□□□□□ -1.38
TOP3A-207ENST00000493648 BAIAP2L1Q9UHR4 511 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 ERRFI1Q9UJM3 462 aaPredicted RBP6.43□□□□□ -1.38
TOP3A-207ENST00000493648 BOKQ9UMX3 212 aaPredicted RBP6.43□□□□□ -1.38
TOP3A-207ENST00000493648 ZNF835Q9Y2P0 537 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 PTGDR2Q9Y5Y4 395 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.43□□□□□ -1.38
TOP3A-207ENST00000493648 GTF3C1Q12789 2109 aa6.43□□□□□ -1.38
TOP3A-207ENST00000493648 NINQ8N4C6 2090 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 A0A087WV62 115 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 A0A1B0GTH9 108 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 ATP6AP2A0A1C7CYW4 349 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 PINLYPA6NC86 204 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 FRG2CA6NGY1 282 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 FAM166BA8MTA8 275 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 PLOD2O00469 737 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 PRRG2O14669 202 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 TO15178 435 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 PDPK1O15530 556 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 AKAP10O43572 662 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 ITM2AO43736 263 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 TBX19O60806 448 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 COQ9O75208 318 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 SKAP2O75563 359 aaPredicted RBP6.42□□□□□ -1.38
TOP3A-207ENST00000493648 REM1O75628 298 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 PPM1BO75688 479 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 ATP6AP2O75787 350 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 WISP2O76076 250 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 PDE9AO76083 593 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 LRATO95237 230 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 LDLRP01130 860 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 ABCB1P08183 1280 aaPredicted RBP6.42□□□□□ -1.38
TOP3A-207ENST00000493648 PRPS2P11908 318 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 BCKDHAP12694 445 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 SDC1P18827 310 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 TACR1P25103 407 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 ABCD3P28288 659 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 PTGER1P34995 402 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 GPC1P35052 558 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 PTGS2P35354 604 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 PIGAP37287 484 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 RPL3P39023 403 aaKnown RBP6.42□□□□□ -1.38
TOP3A-207ENST00000493648 CA7P43166 264 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 DNASE1L1P49184 302 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 EMDP50402 254 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 RPL14P50914 215 aaKnown RBP6.42□□□□□ -1.38
TOP3A-207ENST00000493648 SLC18A1P54219 525 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 MANFP55145 182 aaKnown RBP6.42□□□□□ -1.38
TOP3A-207ENST00000493648 FBXW4P57775 412 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 MAGOHP61326 146 aaKnown RBP6.42□□□□□ -1.38
TOP3A-207ENST00000493648 MAD2L1Q13257 205 aaPredicted RBP6.42□□□□□ -1.38
TOP3A-207ENST00000493648 MPP2Q14168 576 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 RPS6KA2Q15349 733 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 PRSS53Q2L4Q9 553 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 HYAL4Q2M3T9 481 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 SMU1Q2TAY7 513 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 ATP6AP1LQ52LC2 224 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 XKR7Q5GH72 579 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 C6orf136Q5SQH8 315 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 PRAMEF20Q5VT98 475 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 ARHGAP11AQ6P4F7 1023 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 TMEM64Q6YI46 380 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 Q6ZPB1 254 aaPredicted RBP6.42□□□□□ -1.38
TOP3A-207ENST00000493648 PACS2Q86VP3 889 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 TRIM42Q8IWZ5 723 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 PRR22Q8IZ63 422 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 EID3Q8N140 333 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 FBXW8Q8N3Y1 598 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 FAM109AQ8N4B1 249 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 NATD1Q8N6N6 113 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 ANKRD42Q8N9B4 389 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 FNDC5Q8NAU1 212 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 OR7G2Q8NG99 324 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 OR52N2Q8NGI0 321 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 ZFP28Q8NHY6 868 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 SPPL2AQ8TCT8 520 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 GFM2Q969S9 779 aaKnown RBP6.42□□□□□ -1.38
TOP3A-207ENST00000493648 TMCO6Q96DC7 493 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 OMA1Q96E52 524 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 ZNF764Q96H86 408 aaPredicted RBP6.42□□□□□ -1.38
TOP3A-207ENST00000493648 EGLN2Q96KS0 407 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 FCRL1Q96LA6 429 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 JSRP1Q96MG2 331 aaPredicted RBP6.42□□□□□ -1.38
TOP3A-207ENST00000493648 AMDHD1Q96NU7 426 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 TSSK3Q96PN8 268 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 PRPF18Q99633 342 aaKnown RBP6.42□□□□□ -1.38
TOP3A-207ENST00000493648 DOHHQ9BU89 302 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 ANGPTL4Q9BY76 406 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 TTTY12Q9BZ98 90 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 NXF5Q9H1B4 397 aaKnown RBP6.42□□□□□ -1.38
TOP3A-207ENST00000493648 GLIPR2Q9H4G4 154 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 LDAHQ9H6V9 325 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 TMBIM4Q9HC24 238 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 SH2D2AQ9NP31 389 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 ZFP64Q9NPA5 681 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 ARGLU1Q9NWB6 273 aaPredicted RBP6.42□□□□□ -1.38
TOP3A-207ENST00000493648 TUBA8Q9NY65 449 aaPredicted RBP6.42□□□□□ -1.38
TOP3A-207ENST00000493648 NKIRAS1Q9NYS0 192 aa6.42□□□□□ -1.38
TOP3A-207ENST00000493648 B4GALT7Q9UBV7 327 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms