RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 FAM180AQ6UWF9 173 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 TMEM64Q6YI46 380 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 SZRD1Q7Z422 152 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 MDGA2Q7Z553 956 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.9□□□□□ -0.34
CCM2-217ENST00000492883 OR2L13Q8N349 312 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 FAM13CQ8NE31 585 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 C17orf47Q8NEP4 570 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 OR5M3Q8NGP4 307 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 GRHL3Q8TE85 626 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 OR5P2Q8WZ92 322 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 SPACA9Q96E40 222 aaPredicted RBP12.9□□□□□ -0.34
CCM2-217ENST00000492883 THOC1Q96FV9 657 aaKnown RBP12.9□□□□□ -0.34
CCM2-217ENST00000492883 ZBTB18Q99592 522 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 NXF5Q9H1B4 397 aaKnown RBP12.9□□□□□ -0.34
CCM2-217ENST00000492883 TCF7L2Q9NQB0 619 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 AGPAT4Q9NRZ5 378 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 ASF1BQ9NVP2 202 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 SNX8Q9Y5X2 465 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 NPFFR2Q9Y5X5 522 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 GPR45Q9Y5Y3 372 aa12.9□□□□□ -0.34
CCM2-217ENST00000492883 SCN2AQ99250 2005 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 FRG2CA6NGY1 282 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 KLRC4-KLRK1H3BQV0 150 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 ANKRD28O15084 1053 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 NME2P1O60361 137 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 EDF1O60869 148 aaKnown RBP12.89□□□□□ -0.35
CCM2-217ENST00000492883 ERN1O75460 977 aaKnown RBP12.89□□□□□ -0.35
CCM2-217ENST00000492883 C6orf47O95873 294 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 CRYABP02511 175 aaKnown RBP12.89□□□□□ -0.35
CCM2-217ENST00000492883 P04436 131 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 ABCB1P08183 1280 aaPredicted RBP12.89□□□□□ -0.35
CCM2-217ENST00000492883 FBXO45P0C2W1 286 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 IDO1P14902 403 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 NME2P22392 152 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 S100A3P33764 101 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 KIR3DL1P43629 444 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 TMED10P49755 219 aaKnown RBP12.89□□□□□ -0.35
CCM2-217ENST00000492883 GUCY1A3Q02108 690 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 ZNF155Q12901 538 aaPredicted RBP12.89□□□□□ -0.35
CCM2-217ENST00000492883 ZNHIT3Q15649 155 aaPredicted RBP12.89□□□□□ -0.35
CCM2-217ENST00000492883 IGFBP7Q16270 282 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 GSTA3Q16772 222 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 ZNF791Q3KP31 576 aaPredicted RBP12.89□□□□□ -0.35
CCM2-217ENST00000492883 SLC22A10Q63ZE4 541 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 OR4F3Q6IEY1 312 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 LYPD8Q6UX82 237 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 CAMKMTQ7Z624 323 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 SULF2Q8IWU5 870 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 DND1Q8IYX4 353 aaKnown RBP12.89□□□□□ -0.35
CCM2-217ENST00000492883 PRR22Q8IZ63 422 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 BCORP1Q8N888 145 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 GOLM1Q8NBJ4 401 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 PSD4Q8NDX1 1056 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 VPS37AQ8NEZ2 397 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 TESCQ96BS2 214 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 HSPBAP1Q96EW2 488 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 MARK4Q96L34 752 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 VSTM2LQ96N03 204 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 EBF4Q9BQW3 602 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 FOLH1BQ9HBA9 442 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 PCDHGB4Q9UN71 923 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 NTNG1Q9Y2I2 539 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 GPR55Q9Y2T6 319 aaPredicted RBP12.89□□□□□ -0.35
CCM2-217ENST00000492883 OR10H1Q9Y4A9 318 aa12.89□□□□□ -0.35
CCM2-217ENST00000492883 E9PBE3 544 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 TP53I11O14683 189 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 ACOX3O15254 700 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 EMC8O43402 210 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 PEX1O43933 1283 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 SLC22A3O75751 556 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 VIMP08670 466 aaKnown RBP12.88□□□□□ -0.35
CCM2-217ENST00000492883 IFI6P09912 130 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 CT45A8P0DMV1 189 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 CT45A9P0DMV2 189 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 PLA2G2AP14555 144 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 ABCD3P28288 659 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 CORO7P57737 925 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 GPR85P60893 370 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 PRR5P85299 388 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 PMP22Q01453 160 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 PLCXD2Q0VAA5 305 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 DPY19L1Q2PZI1 675 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 FAM174BQ3ZCQ3 159 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 SPDYE7PQ495Y7 208 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 PDCD4Q53EL6 469 aaKnown RBP12.88□□□□□ -0.35
CCM2-217ENST00000492883 CT45A2Q5DJT8 189 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 ANXA8L1Q5VT79 327 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 ATCAYQ86WG3 371 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 SLC44A2Q8IWA5 706 aaPredicted RBP12.88□□□□□ -0.35
CCM2-217ENST00000492883 NUP43Q8NFH3 380 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 OR8J2Q8NGG1 315 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 DNAJB8Q8NHS0 232 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 FAR1Q8WVX9 515 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 TEX37Q96LM6 180 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 BTBD9Q96Q07 612 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 TAAR6Q96RI8 345 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 CCDC28BQ9BUN5 200 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 CLMPQ9H6B4 373 aa12.88□□□□□ -0.35
CCM2-217ENST00000492883 EQTNQ9NQ60 294 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms