RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 RRP9O43818 475 aaKnown RBP17.31■□□□□ 0.36
MCF2L-230ENST00000491028 SOX30O94993 753 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 HMGN2P05204 90 aaKnown RBP17.31■□□□□ 0.36
MCF2L-230ENST00000491028 WT1P19544 449 aaPredicted RBP17.31■□□□□ 0.36
MCF2L-230ENST00000491028 SLC6A2P23975 617 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 CPOXP36551 454 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 EMDP50402 254 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 PSME3P61289 254 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 SLC25A3Q00325 362 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 CDC20Q12834 499 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 ZNF155Q12901 538 aaPredicted RBP17.31■□□□□ 0.36
MCF2L-230ENST00000491028 FADDQ13158 208 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 LASP1Q14847 261 aaKnown RBP17.31■□□□□ 0.36
MCF2L-230ENST00000491028 MYBPC3Q14896 1274 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 ZSCAN26Q16670 478 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 DNAL1Q4LDG9 190 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 ANGPTL8Q6UXH0 198 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 UNQ6494/PRO21346Q6UXR6 183 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 RINLQ6ZS11 566 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 SLC29A4Q7RTT9 530 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 YTHDF3Q7Z739 585 aaKnown RBP17.31■□□□□ 0.36
MCF2L-230ENST00000491028 ZNF321PQ8N8H1 164 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 CDRT4Q8N9R6 151 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 ZSCAN1Q8NBB4 408 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 SIMC1Q8NDZ2 872 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 C16orf52Q8NHV5 167 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 FBXO27Q8NI29 283 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 ELP5Q8TE02 316 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 HOXB13Q92826 284 aaPredicted RBP17.31■□□□□ 0.36
MCF2L-230ENST00000491028 SLC7A6OSQ96CW6 309 aaPredicted RBP17.31■□□□□ 0.36
MCF2L-230ENST00000491028 ACTRT3Q9BYD9 372 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 FOLH1BQ9HBA9 442 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 SPAG4Q9NPE6 437 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 EQTNQ9NQ60 294 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 TAS2R1Q9NYW7 299 aa17.31■□□□□ 0.36
MCF2L-230ENST00000491028 ASNA1O43681 348 aa17.3■□□□□ 0.36
MCF2L-230ENST00000491028 GPX2P18283 190 aa17.3■□□□□ 0.36
MCF2L-230ENST00000491028 MATN1P21941 496 aa17.3■□□□□ 0.36
MCF2L-230ENST00000491028 KHKP50053 298 aa17.3■□□□□ 0.36
MCF2L-230ENST00000491028 MVDP53602 400 aa17.3■□□□□ 0.36
MCF2L-230ENST00000491028 RRADP55042 308 aa17.3■□□□□ 0.36
MCF2L-230ENST00000491028 MTPNP58546 118 aa17.3■□□□□ 0.36
MCF2L-230ENST00000491028 EBPQ15125 230 aaKnown RBP17.3■□□□□ 0.36
MCF2L-230ENST00000491028 ZNHIT3Q15649 155 aaPredicted RBP17.3■□□□□ 0.36
MCF2L-230ENST00000491028 LACTB2Q53H82 288 aaPredicted RBP17.3■□□□□ 0.36
MCF2L-230ENST00000491028 EXOSC6Q5RKV6 272 aaKnown RBP17.3■□□□□ 0.36
MCF2L-230ENST00000491028 BROXQ5VW32 411 aa17.3■□□□□ 0.36
MCF2L-230ENST00000491028 CDC73Q6P1J9 531 aa17.3■□□□□ 0.36
MCF2L-230ENST00000491028 HSDL2Q6YN16 418 aa17.3■□□□□ 0.36
MCF2L-230ENST00000491028 RNF130Q86XS8 419 aa17.3■□□□□ 0.36
MCF2L-230ENST00000491028 SPACA3Q8IXA5 215 aa17.3■□□□□ 0.36
MCF2L-230ENST00000491028 C9orf40Q8IXQ3 194 aa17.3■□□□□ 0.36
MCF2L-230ENST00000491028 LGI4Q8N135 537 aa17.3■□□□□ 0.36
MCF2L-230ENST00000491028 TMEM125Q96AQ2 219 aa17.3■□□□□ 0.36
MCF2L-230ENST00000491028 VSTM2LQ96N03 204 aa17.3■□□□□ 0.36
MCF2L-230ENST00000491028 LMF2Q9BU23 707 aaKnown RBP17.3■□□□□ 0.36
MCF2L-230ENST00000491028 THUMPD3Q9BV44 507 aaKnown RBP17.3■□□□□ 0.36
MCF2L-230ENST00000491028 GIN1Q9NXP7 522 aa17.3■□□□□ 0.36
MCF2L-230ENST00000491028 ABCD2Q9UBJ2 740 aa17.3■□□□□ 0.36
MCF2L-230ENST00000491028 ZNF223Q9UK11 482 aaPredicted RBP17.3■□□□□ 0.36
MCF2L-230ENST00000491028 TRBV11-1A0A0K0K1C0 115 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 DUXAA6NLW8 204 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 NKX2-8O15522 239 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 ZFAND5O76080 213 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 AGR2O95994 175 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 SERPINA7P05543 415 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 SLC7A2P52569 658 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 DCAF7P61962 342 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 RGNQ15493 299 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 RABL3Q5HYI8 236 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 DCAF10Q5QP82 559 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 LRRC69Q6ZNQ3 347 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 DEFB107AQ8IZN7 70 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 TMEM102Q8N9M5 508 aaPredicted RBP17.29■□□□□ 0.36
MCF2L-230ENST00000491028 C17orf47Q8NEP4 570 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 OR5L2Q8NGL0 311 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 NUBPLQ8TB37 319 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 PNPT1Q8TCS8 783 aaKnown RBP17.29■□□□□ 0.36
MCF2L-230ENST00000491028 STACQ99469 402 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 BTBD10Q9BSF8 475 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 ITPAQ9BY32 194 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 SERHL2Q9H4I8 314 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 IKZF5Q9H5V7 419 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 KAT8Q9H7Z6 458 aaKnown RBP17.29■□□□□ 0.36
MCF2L-230ENST00000491028 THUMPD1Q9NXG2 353 aaKnown RBP17.29■□□□□ 0.36
MCF2L-230ENST00000491028 POLHQ9Y253 713 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 L3MBTL1Q9Y468 752 aa17.29■□□□□ 0.36
MCF2L-230ENST00000491028 C2orf92A0A1B0GVN3 265 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 TMEM8BA6NDV4 472 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 C1QTNF9BB2RNN3 333 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 GYG2O15488 501 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 EFSO43281 561 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 ALOX5P09917 674 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 C1QTNF9P0C862 333 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 PRKAR1AP10644 381 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 BMP2P12643 396 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 MAP3K8P41279 467 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 CRATP43155 626 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 MAN2A2P49641 1150 aa17.28■□□□□ 0.36
MCF2L-230ENST00000491028 NCALDP61601 193 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms