RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 MAGEA5P43359 124 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 SERPINB4P48594 390 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 NRG3P56975 720 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 NUP107P57740 925 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 TFF3Q07654 80 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 FOXO1Q12778 655 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 CSTF3Q12996 717 aaKnown RBP9.54□□□□□ -0.88
TTC28-207ENST00000490475 HSPB2Q16082 182 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 ARL13AQ5H913 290 aaPredicted RBP9.54□□□□□ -0.88
TTC28-207ENST00000490475 EMC4Q5J8M3 183 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 RIPPLY2Q5TAB7 128 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 HLA-DQA1Q5Y7H0 255 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 TMEM198Q66K66 360 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 OR52E8Q6IFG1 317 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 ZNF585AQ6P3V2 769 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 C16orf47Q6ZP98 133 aaPredicted RBP9.54□□□□□ -0.88
TTC28-207ENST00000490475 NCCRP1Q6ZVX7 275 aaPredicted RBP9.54□□□□□ -0.88
TTC28-207ENST00000490475 NUDT13Q86X67 352 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 NUDCD3Q8IVD9 361 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 PM20D2Q8IYS1 436 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 LIX1Q8N485 282 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 GBP7Q8N8V2 638 aaPredicted RBP9.54□□□□□ -0.88
TTC28-207ENST00000490475 DOK4Q8TEW6 326 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 RIT1Q92963 219 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 PPWD1Q96BP3 646 aaKnown RBP9.54□□□□□ -0.88
TTC28-207ENST00000490475 APIPQ96GX9 242 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 TACO1Q9BSH4 297 aaKnown RBP9.54□□□□□ -0.88
TTC28-207ENST00000490475 CNPPD1Q9BV87 410 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 ACPTQ9BZG2 426 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 TMBIM4Q9HC24 238 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 SH2D2AQ9NP31 389 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 SSU72Q9NP77 194 aaKnown RBP9.54□□□□□ -0.88
TTC28-207ENST00000490475 PNPLA3Q9NST1 481 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 NMRK1Q9NWW6 199 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 FOXD3Q9UJU5 478 aaPredicted RBP9.54□□□□□ -0.88
TTC28-207ENST00000490475 ADAM29Q9UKF5 820 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 ITGB1BP2Q9UKP3 347 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 CFL2Q9Y281 166 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 ARHGAP21Q5T5U3 1957 aa9.54□□□□□ -0.88
TTC28-207ENST00000490475 ATP6AP2A0A1C7CYW4 349 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 SERTM1A2A2V5 107 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 PINLYPA6NC86 204 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 AHRRA9YTQ3 701 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 AZIN1O14977 448 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 NPHS1O60500 1241 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 ATP6AP2O75787 350 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 ZWINTO95229 277 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 AIFM1O95831 613 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 CCL3P10147 92 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 UROSP10746 265 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 HSD3B1P14060 373 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 HSD3B2P26439 372 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 PIK3R1P27986 724 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 GCKP35557 465 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 DNASE1L1P49184 302 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 SLC37A1P57057 533 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 MAGOHP61326 146 aaKnown RBP9.53□□□□□ -0.88
TTC28-207ENST00000490475 RAE1P78406 368 aaKnown RBP9.53□□□□□ -0.88
TTC28-207ENST00000490475 MYBPHQ13203 477 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 NTRK2Q16620 822 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 SPDYAQ5MJ70 313 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 C1orf185Q5T7R7 199 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 AGBL2Q5U5Z8 902 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 DGAT2L6Q6ZPD8 337 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 C9orf40Q8IXQ3 194 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 C10orf67Q8IYJ2 551 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 MMP21Q8N119 569 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 LRRC25Q8N386 305 aaPredicted RBP9.53□□□□□ -0.88
TTC28-207ENST00000490475 FAM13CQ8NE31 585 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 C17orf47Q8NEP4 570 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 OR5M9Q8NGP3 310 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 OR6Y1Q8NGX8 325 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 NEIL3Q8TAT5 605 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 SREK1Q8WXA9 508 aaKnown RBP9.53□□□□□ -0.88
TTC28-207ENST00000490475 TM4SF18Q96CE8 201 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 ATP6V1G3Q96LB4 118 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 ZNF597Q96LX8 424 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 PAIP2Q9BPZ3 127 aaKnown RBP9.53□□□□□ -0.88
TTC28-207ENST00000490475 TRMOQ9BU70 441 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 DOHHQ9BU89 302 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 WWTR1Q9GZV5 400 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 ZNF703Q9H7S9 590 aaPredicted RBP9.53□□□□□ -0.88
TTC28-207ENST00000490475 ZNF395Q9H8N7 513 aaPredicted RBP9.53□□□□□ -0.88
TTC28-207ENST00000490475 TEX10Q9NXF1 929 aaPredicted RBP9.53□□□□□ -0.88
TTC28-207ENST00000490475 TUBA8Q9NY65 449 aaPredicted RBP9.53□□□□□ -0.88
TTC28-207ENST00000490475 TNFRSF10DQ9UBN6 386 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 FIS1Q9Y3D6 152 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 HRH3Q9Y5N1 445 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 PTGDR2Q9Y5Y4 395 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 ACTL7BQ9Y614 415 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 HIVEP1P15822 2718 aa9.53□□□□□ -0.88
TTC28-207ENST00000490475 CELSR1Q9NYQ6 3014 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 C2orf92A0A1B0GVN3 265 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 A0A1W2PS29 197 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 NKX2-6A6NCS4 301 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 TMEM233B4DJY2 109 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 G3V3Y1 287 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 DVL2O14641 736 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 TM9SF1O15321 606 aa9.52□□□□□ -0.89
TTC28-207ENST00000490475 ZNHIT1O43257 154 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms