RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 TUBA1CQ9BQE3 449 aa6.69□□□□□ -1.34
EXOSC3-206ENST00000489414 UGT2B28Q9BY64 529 aa6.69□□□□□ -1.34
EXOSC3-206ENST00000489414 SLC25A51Q9H1U9 297 aa6.69□□□□□ -1.34
EXOSC3-206ENST00000489414 SACM1LQ9NTJ5 587 aa6.69□□□□□ -1.34
EXOSC3-206ENST00000489414 CBLN4Q9NTU7 201 aa6.69□□□□□ -1.34
EXOSC3-206ENST00000489414 C20orf96Q9NUD7 363 aaPredicted RBP6.69□□□□□ -1.34
EXOSC3-206ENST00000489414 PIH1D1Q9NWS0 290 aaKnown RBP6.69□□□□□ -1.34
EXOSC3-206ENST00000489414 SLC17A7Q9P2U7 560 aa6.69□□□□□ -1.34
EXOSC3-206ENST00000489414 CLCF1Q9UBD9 225 aa6.69□□□□□ -1.34
EXOSC3-206ENST00000489414 DCDC2Q9UHG0 476 aa6.69□□□□□ -1.34
EXOSC3-206ENST00000489414 SOX13Q9UN79 622 aa6.69□□□□□ -1.34
EXOSC3-206ENST00000489414 PLLPQ9Y342 182 aa6.69□□□□□ -1.34
EXOSC3-206ENST00000489414 CAPN7Q9Y6W3 813 aa6.69□□□□□ -1.34
EXOSC3-206ENST00000489414 WNK2Q9Y3S1 2297 aa6.69□□□□□ -1.34
EXOSC3-206ENST00000489414 LOC105371242A0A075B767 164 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 TRBV11-1A0A0K0K1C0 115 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 LOC390937A0A1W2PQ73 354 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 WDR91A4D1P6 747 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 SAGE2PA6NJ88 616 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 MAGEB17A8MXT2 336 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 KLF11O14901 512 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 SGTAO43765 313 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 OR2J2O76002 312 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 CGAP01215 116 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 SLC4A1P02730 911 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 APOA4P06727 396 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 CRHP06850 196 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 TACSTD2P09758 323 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 CCL3P10147 92 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 CYP4B1P13584 511 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 SELEP16581 610 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 PDHA2P29803 388 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 CD68P34810 354 aaPredicted RBP6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 SOX3P41225 446 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 XCR1P46094 333 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 SERPINB4P48594 390 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 BMPR2Q13873 1038 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 HKDC1Q2TB90 917 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 OXLD1Q5BKU9 147 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 XKR6Q5GH73 641 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 ALG1LQ6GMV1 187 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 UGT2A3Q6UWM9 527 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 ADAMTSL5Q6ZMM2 481 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 R3HCC1LQ7Z5L2 792 aaKnown RBP6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 STRA8Q7Z7C7 330 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 LCA5Q86VQ0 697 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 LINC01555Q8NAE3 123 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 ZNF540Q8NDQ6 660 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 OR51Q1Q8NH59 317 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 CALML6Q8TD86 181 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 OXNAD1Q96HP4 312 aaPredicted RBP6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 LRRC37BQ96QE4 947 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 RBBP8Q99708 897 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 SLC30A3Q99726 388 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 APOL2Q9BQE5 337 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 FAM167BQ9BTA0 163 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 FICDQ9BVA6 458 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 KIFC1Q9BW19 673 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 COG4Q9H9E3 785 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 ZFP64Q9NPA5 681 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 NT5MQ9NPB1 228 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 SMYD2Q9NRG4 433 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 HIF1ANQ9NWT6 349 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 UBP1Q9NZI7 540 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 PLAGL1Q9UM63 463 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 GRIP1Q9Y3R0 1128 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 ZNF711Q9Y462 761 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 KLK4Q9Y5K2 254 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 ARFGEF3Q5TH69 2177 aa6.68□□□□□ -1.34
EXOSC3-206ENST00000489414 ALMS1Q8TCU4 4167 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 DNAH10Q8IVF4 4471 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 CFAP73A6NFT4 308 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 B4DSR2 109 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 ANKRD65E5RJM6 399 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 DHHO43323 396 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 LILRA1O75019 489 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 H2AFYO75367 372 aaKnown RBP6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 TGDSO95455 350 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 C1QAP02745 245 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 P04436 131 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 HLA-DQB2P05538 268 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 DHRS4L1P0CG22 281 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 LYL1P12980 280 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 SCTRP47872 440 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 RASSF2P50749 326 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 SLC12A2P55011 1212 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 C21orf58P58505 322 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 SNRPNP63162 240 aaKnown RBP6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 PLOD1Q02809 727 aaPredicted RBP6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 ASPHQ12797 758 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 SF3A3Q12874 501 aaKnown RBP eCLIP6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 FAM53BQ14153 422 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 POU6F1Q14863 301 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 CCDC153Q494R4 210 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 ZNF658BQ4V348 819 aaPredicted RBP6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 HSP90AA5PQ58FG0 334 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 FAM182AQ5T1J6 154 aa6.67□□□□□ -1.34
EXOSC3-206ENST00000489414 OLFML2AQ68BL7 652 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms