RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 GOT2P00505 430 aaKnown RBP2.52□□□□□ -2.01
CD46-215ENST00000488596 GSTA1P08263 222 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 FAM200BP0CF97 657 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 GP9P14770 177 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 BRCC3P46736 316 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 IST1P53990 364 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 ATXN3P54252 364 aaPredicted RBP2.52□□□□□ -2.01
CD46-215ENST00000488596 MFAP2P55001 183 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 VCPP55072 806 aaKnown RBP2.52□□□□□ -2.01
CD46-215ENST00000488596 SLC26A5P58743 744 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 IL1RL1Q01638 556 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 NME3Q13232 169 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 GAMTQ14353 236 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 LTB4RQ15722 352 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 CD226Q15762 336 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 HAGHQ16775 308 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 SHROOM1Q2M3G4 852 aaPredicted RBP2.52□□□□□ -2.01
CD46-215ENST00000488596 ZNF699Q32M78 642 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 CNPY1Q3B7I2 92 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 SLC22A6Q4U2R8 563 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 C14orf28Q4W4Y0 310 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 SEL1L2Q5TEA6 688 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 TAF3Q5VWG9 929 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 ZCCHC12Q6PEW1 402 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 CNSTQ6PJW8 725 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 SLC22A18ASQ8N1D0 253 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 ZNF397Q8NF99 534 aaPredicted RBP2.52□□□□□ -2.01
CD46-215ENST00000488596 RBM18Q96H35 190 aaKnown RBP2.52□□□□□ -2.01
CD46-215ENST00000488596 ZNF414Q96IQ9 312 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 FOXN4Q96NZ1 517 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 MCCC1Q96RQ3 725 aaPredicted RBP2.52□□□□□ -2.01
CD46-215ENST00000488596 CPXM1Q96SM3 734 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 PSMB7Q99436 277 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 RPP25Q9BUL9 199 aaKnown RBP2.52□□□□□ -2.01
CD46-215ENST00000488596 FAM124BQ9H5Z6 455 aaPredicted RBP2.52□□□□□ -2.01
CD46-215ENST00000488596 ESM1Q9NQ30 184 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 ABCC13Q9NSE7 274 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 MLXQ9UH92 298 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 PLA2G4CQ9UP65 541 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 FKBP7Q9Y680 259 aa2.52□□□□□ -2.01
CD46-215ENST00000488596 TRAV9-2A0A087WT02 112 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 RNF103-CHMP3A0A140T963 221 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 TRABD2BA6NFA1 517 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 ZNF487B1APH4 448 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 E2F3O00716 465 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 ARPC1BO15143 372 aaKnown RBP2.51□□□□□ -2.01
CD46-215ENST00000488596 SDC3O75056 442 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 ZNF253O75346 499 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 PDE5AO76074 875 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 STK17BO94768 372 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 PDGFBP01127 241 aaPredicted RBP2.51□□□□□ -2.01
CD46-215ENST00000488596 PIGRP01833 764 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 PRDX2P32119 198 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 RFC2P35250 354 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 ELK3P41970 407 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 SLC6A8P48029 635 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 POU3F4P49335 361 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 ARHGDIAP52565 204 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 HMGCS2P54868 508 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 MYBPC1Q00872 1141 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 NAAAQ02083 359 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 GABPB1Q06547 395 aaPredicted RBP2.51□□□□□ -2.01
CD46-215ENST00000488596 HIGD2BQ4VC39 106 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 VWA2Q5GFL6 755 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 IL23RQ5VWK5 629 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 ZNF774Q6NX45 483 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 FAM159AQ6UWV7 190 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 P2RY8Q86VZ1 359 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 GPBP1Q86WP2 473 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 CDC20BQ86Y33 519 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 HPS6Q86YV9 775 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 NAXDQ8IW45 347 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 KDM8Q8N371 416 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 GPATCH11Q8N954 259 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 COLGALT1Q8NBJ5 622 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 FLVCR1-AS1Q8TAF5 88 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 TYMSOSQ8TAI1 123 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 FCGR1BQ92637 280 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 LHX4Q969G2 390 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 MRPL38Q96DV4 380 aaKnown RBP2.51□□□□□ -2.01
CD46-215ENST00000488596 CCDC51Q96ER9 411 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 SAMD8Q96LT4 415 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 FAM111AQ96PZ2 611 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 NDUFAF3Q9BU61 184 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 HSD3B7Q9H2F3 369 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 TSPY26PQ9H489 355 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 STARD5Q9NSY2 213 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 SOHLH2Q9NX45 425 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 ZNF581Q9P0T4 197 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 ODF2LQ9ULJ1 636 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 PIN4Q9Y237 131 aaKnown RBP2.51□□□□□ -2.01
CD46-215ENST00000488596 PLEKHA6Q9Y2H5 1048 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 FER1L5A0AVI2 2057 aa2.51□□□□□ -2.01
CD46-215ENST00000488596 UBE4BO95155 1302 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 IMPA2O14732 288 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 TYROBPO43914 113 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 PRPSAP2O60256 369 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 ZNF354AO60765 605 aaPredicted RBP2.5□□□□□ -2.01
CD46-215ENST00000488596 STAM2O75886 525 aa2.5□□□□□ -2.01
CD46-215ENST00000488596 NUDT14O95848 222 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms