RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, human

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-215	ENST00000488317	BCOR	Q6W2J9	1755 aa		4.07	□□□□□ -1.76
SRRM1-215	ENST00000488317	LRP6	O75581	1613 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	KDM6A	O15550	1401 aa	Predicted RBP	4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	UBE4B	O95155	1302 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	FAM205A	Q6ZU69	1335 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	SHISA7	A6NL88	538 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	NPIPB9	F8W1W9	429 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	STX10	O60499	249 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	LRP3	O75074	770 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	SOCS5	O75159	536 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	CS	O75390	466 aa	Known RBP	4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	MTRF1	O75570	445 aa	Known RBP	4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	SMC2	O95347	1197 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	ANGPTL1	O95841	491 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	IVL	P07476	585 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	APRT	P07741	180 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	MBL2	P11226	248 aa	Predicted RBP	4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	PRKACG	P22612	351 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	FCAR	P24071	287 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	CALR	P27797	417 aa	Known RBP	4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	PKLR	P30613	574 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	NUMB	P49757	651 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	FHIT	P49789	147 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	CCL11	P51671	97 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	LIMK2	P53671	638 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	NLRP11	P59045	1033 aa	Known RBP	4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	RBBP4	Q09028	425 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	HSPA14	Q0VDF9	509 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	MEF2D	Q14814	521 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	EXOSC7	Q15024	291 aa	Known RBP	4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	STK38	Q15208	465 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	RABL6	Q3YEC7	729 aa	Predicted RBP	4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	ADAMTSL4-AS1	Q5T5F5	129 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	DDI2	Q5TDH0	399 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	ARHGAP17	Q68EM7	881 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	CDC42EP5	Q6NZY7	148 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	ZNF530	Q6P9A1	599 aa	Predicted RBP	4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	TRIM65	Q6PJ69	517 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	UNC5D	Q6UXZ4	953 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	SYT10	Q6XYQ8	523 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	ZNF589	Q86UQ0	364 aa	Predicted RBP	4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	VSTM4	Q8IW00	320 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	PARP8	Q8N3A8	854 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	LRRC17	Q8N6Y2	441 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	LINC00301	Q8NCQ3	95 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	ADAD2	Q8NCV1	583 aa	Known RBP	4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	FAM76A	Q8TAV0	307 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	U2AF1L4	Q8WU68	220 aa	Known RBP	4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	TCP11	Q8WWU5	503 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	MRPL24	Q96A35	216 aa	Known RBP	4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	C14orf79	Q96F83	325 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	USP28	Q96RU2	1077 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	FGF22	Q9HCT0	170 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	TECR	Q9NZ01	308 aa	Known RBP	4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	CNOT2	Q9NZN8	540 aa	Known RBP	4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	IFNK	Q9P0W0	207 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	DIMT1	Q9UNQ2	313 aa	Known RBP	4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	ENTPD4	Q9Y227	616 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	KIF13B	Q9NQT8	1826 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	LAMB1	P07942	1786 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	LAMB2	P55268	1798 aa		4.06	□□□□□ -1.76
SRRM1-215	ENST00000488317	BCL9L	Q86UU0	1499 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	MYH7B	A7E2Y1	1941 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	CPD	O75976	1380 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	NID2	Q14112	1375 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317		A8MU76	341 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	INPP4B	O15327	924 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	GRID2	O43424	1007 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	ERLIN1	O75477	346 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	CEACAM4	O75871	244 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	ANXA9	O76027	345 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	CTDNEP1	O95476	244 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	GUCA1C	O95843	209 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	RALA	P11233	206 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	AOC1	P19801	751 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	EIF2S2	P20042	333 aa	Known RBP	4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	GLRA1	P23415	457 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	PDHA2	P29803	388 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	MTTP	P55157	894 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	MYBPC1	Q00872	1141 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	MFGE8	Q08431	387 aa	Predicted RBP	4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	SPP2	Q13103	211 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	NME3	Q13232	169 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	C1orf189	Q5VU69	101 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	LIPJ	Q5W064	366 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	BSPRY	Q5W0U4	402 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	ARHGAP11A	Q6P4F7	1023 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	ADGRD2	Q7Z7M1	963 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	CATSPERD	Q86XM0	798 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	WDR49	Q8IV35	697 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	KLHDC8B	Q8IXV7	354 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	ZBTB44	Q8NCP5	570 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	NUP37	Q8NFH4	326 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	OR2T6	Q8NHC8	308 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	ZNF519	Q8TB69	540 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	LIPH	Q8WWY8	451 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	PHYHIP	Q92561	330 aa		4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	MRPL38	Q96DV4	380 aa	Known RBP	4.05	□□□□□ -1.76
SRRM1-215	ENST00000488317	PANX2	Q96RD6	677 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms