RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 PACSIN2Q9UNF0 486 aaPredicted RBP3.17□□□□□ -1.9
HFM1-208ENST00000488023 PIGLQ9Y2B2 252 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 HS3ST3B1Q9Y662 390 aa3.17□□□□□ -1.9
HFM1-208ENST00000488023 UMODL1Q5DID0 1318 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 CARMIL1Q5VZK9 1371 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 IGLV5-52A0A0A0MRZ9 124 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 PPIAL4CA0A0B4J2A2 164 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 PCP4L1A6NKN8 68 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 ANHXE9PGG2 379 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 PRR23D1E9PI22 279 aaPredicted RBP3.16□□□□□ -1.9
HFM1-208ENST00000488023 H3BTX0 84 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 LRCH4O75427 683 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 BAG4O95429 457 aaKnown RBP3.16□□□□□ -1.9
HFM1-208ENST00000488023 OTCP00480 354 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 LYNP07948 512 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 PRR23D2P0DMB1 279 aaPredicted RBP3.16□□□□□ -1.9
HFM1-208ENST00000488023 PPIAL4GP0DN37 164 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 DBTP11182 482 aaKnown RBP3.16□□□□□ -1.9
HFM1-208ENST00000488023 UQCRBP14927 111 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 CD9P21926 228 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 MAT2AP31153 395 aaKnown RBP3.16□□□□□ -1.9
HFM1-208ENST00000488023 BMI1P35226 326 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 ATP5C1P36542 298 aaKnown RBP3.16□□□□□ -1.9
HFM1-208ENST00000488023 MATKP42679 507 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 MAGEA5P43359 124 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 CCT3P49368 545 aaKnown RBP3.16□□□□□ -1.9
HFM1-208ENST00000488023 PLA2G16P53816 162 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 MRPS6P82932 125 aaKnown RBP3.16□□□□□ -1.9
HFM1-208ENST00000488023 BDH1Q02338 343 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 CSTF1Q05048 431 aaKnown RBP3.16□□□□□ -1.9
HFM1-208ENST00000488023 TFDP1Q14186 410 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 GRB14Q14449 540 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 CALCRLQ16602 461 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 PRTGQ2VWP7 1150 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 CTSL3PQ5NE16 218 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 PIP5KL1Q5T9C9 394 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 PLPP4Q5VZY2 271 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 DMKNQ6E0U4 476 aaPredicted RBP3.16□□□□□ -1.9
HFM1-208ENST00000488023 OR2A2Q6IF42 318 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 TCEAL6Q6IPX3 200 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 STEAP1BQ6NZ63 245 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 Q6ZRG5 221 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 RFPL4BQ6ZWI9 263 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 BZW1Q7L1Q6 419 aaKnown RBP3.16□□□□□ -1.9
HFM1-208ENST00000488023 KMT5CQ86Y97 462 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 ELMOD1Q8N336 334 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 TCEANCQ8N8B7 351 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 SLC37A3Q8NCC5 494 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 SPATA4Q8NEY3 305 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 OR1L4Q8NGR5 311 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 OR13C3Q8NGS6 347 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 OR9A1PQ8NGU1 263 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 ZNF473Q8WTR7 871 aaKnown RBP3.16□□□□□ -1.9
HFM1-208ENST00000488023 SCFD1Q8WVM8 642 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 ASB5Q8WWX0 329 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 ST8SIA1Q92185 356 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 MRPL24Q96A35 216 aaKnown RBP3.16□□□□□ -1.9
HFM1-208ENST00000488023 PELI1Q96FA3 418 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 AMDHD1Q96NU7 426 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 RPRD1AQ96P16 312 aaPredicted RBP3.16□□□□□ -1.9
HFM1-208ENST00000488023 TGM7Q96PF1 710 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 RIT2Q99578 217 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 SLC7A5P2Q9GIP4 190 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 HAUS4Q9H6D7 363 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 LPAR2Q9HBW0 351 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 ZNHIT6Q9NWK9 470 aaKnown RBP3.16□□□□□ -1.9
HFM1-208ENST00000488023 OCIAD1Q9NX40 245 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 GCNT4Q9P109 453 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 ADAM28Q9UKQ2 775 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 FZR1Q9UM11 496 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 MEMO1Q9Y316 297 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 WDR45Q9Y484 360 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 FKBP7Q9Y680 259 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 COMMD3-BMI1R4GMX3 469 aa3.16□□□□□ -1.9
HFM1-208ENST00000488023 TTC26A0AVF1 554 aa3.15□□□□□ -1.9
HFM1-208ENST00000488023 ESYT2A0FGR8 921 aa3.15□□□□□ -1.9
HFM1-208ENST00000488023 ERVV-2B6SEH9 535 aa3.15□□□□□ -1.9
HFM1-208ENST00000488023 BTN3A3O00478 584 aa3.15□□□□□ -1.9
HFM1-208ENST00000488023 POLR3GO15318 223 aaPredicted RBP3.15□□□□□ -1.9
HFM1-208ENST00000488023 NVLO15381 856 aaKnown RBP3.15□□□□□ -1.9
HFM1-208ENST00000488023 DUX1O43812 170 aa3.15□□□□□ -1.9
HFM1-208ENST00000488023 KCNJ13O60928 360 aa3.15□□□□□ -1.9
HFM1-208ENST00000488023 ANXA9O76027 345 aa3.15□□□□□ -1.9
HFM1-208ENST00000488023 RHOXF2BP0C7M4 288 aa3.15□□□□□ -1.9
HFM1-208ENST00000488023 CDH1P12830 882 aa3.15□□□□□ -1.9
HFM1-208ENST00000488023 HOXB2P14652 356 aa3.15□□□□□ -1.9
HFM1-208ENST00000488023 CYP2B6P20813 491 aa3.15□□□□□ -1.9
HFM1-208ENST00000488023 CPN2P22792 545 aa3.15□□□□□ -1.9
HFM1-208ENST00000488023 UCP1P25874 307 aa3.15□□□□□ -1.9
HFM1-208ENST00000488023 HNRNPH3P31942 346 aaKnown RBP3.15□□□□□ -1.9
HFM1-208ENST00000488023 USP8P40818 1118 aa3.15□□□□□ -1.9
HFM1-208ENST00000488023 RPS5P46782 204 aaKnown RBP3.15□□□□□ -1.9
HFM1-208ENST00000488023 FUT6P51993 359 aa3.15□□□□□ -1.9
HFM1-208ENST00000488023 BACE1P56817 501 aa3.15□□□□□ -1.9
HFM1-208ENST00000488023 EWSR1Q01844 656 aaKnown RBP eCLIP3.15□□□□□ -1.9
HFM1-208ENST00000488023 DRP2Q13474 957 aa3.15□□□□□ -1.9
HFM1-208ENST00000488023 NFATC4Q14934 902 aa3.15□□□□□ -1.9
HFM1-208ENST00000488023 DUSP5Q16690 384 aa3.15□□□□□ -1.9
HFM1-208ENST00000488023 HIKESHIQ53FT3 197 aa3.15□□□□□ -1.9
HFM1-208ENST00000488023 HSP90B2PQ58FF3 399 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms