RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, humanhuman

TSL 4

Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-208ENST00000487876 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.86□□□□□ -0.51
RPSA-208ENST00000487876 PHF3Q92576 2039 aaKnown RBP11.86□□□□□ -0.51
RPSA-208ENST00000487876 ABCA12Q86UK0 2595 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 DCHS2Q6V1P9 2916 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 ATP6AP2A0A1C7CYW4 349 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 SLC28A1O00337 649 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 PIP5K1BO14986 540 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 LSM1O15116 133 aaKnown RBP11.85□□□□□ -0.51
RPSA-208ENST00000487876 RGS16O15492 202 aaPredicted RBP11.85□□□□□ -0.51
RPSA-208ENST00000487876 RGS14O43566 566 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 ATP6AP2O75787 350 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 JUNP05412 331 aaKnown RBP11.85□□□□□ -0.51
RPSA-208ENST00000487876 TPOP07202 933 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 SDC1P18827 310 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 GSTM5P46439 218 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 NRG3P56975 720 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 RPL38P63173 70 aaKnown RBP11.85□□□□□ -0.51
RPSA-208ENST00000487876 CDSNQ15517 529 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 CEBPEQ15744 281 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 GALNTL6Q49A17 601 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 SH2D4BQ5SQS7 431 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 CEP85LQ5SZL2 805 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 ANKRD26P1Q6NSI1 321 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 EXOC3L1Q86VI1 746 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 DDIASQ8IXT1 998 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 DND1Q8IYX4 353 aaKnown RBP11.85□□□□□ -0.51
RPSA-208ENST00000487876 FAM109AQ8N4B1 249 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 C17orf47Q8NEP4 570 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 OR7G2Q8NG99 324 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 OR6Y1Q8NGX8 325 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 CLHC1Q8NHS4 586 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 FAM76AQ8TAV0 307 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 FAM57AQ8TBR7 257 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 DIO2Q92813 273 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 GFM2Q969S9 779 aaKnown RBP11.85□□□□□ -0.51
RPSA-208ENST00000487876 JSRP1Q96MG2 331 aaPredicted RBP11.85□□□□□ -0.51
RPSA-208ENST00000487876 ZIM3Q96PE6 472 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 BBS4Q96RK4 519 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 CENPHQ9H3R5 247 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 ZNF703Q9H7S9 590 aaPredicted RBP11.85□□□□□ -0.51
RPSA-208ENST00000487876 LRTM1Q9HBL6 345 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 MIEF1Q9NQG6 463 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 GIMAP4Q9NUV9 329 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 C1orf109Q9NX04 203 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 TRAF6Q9Y4K3 522 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 ADGRG4Q8IZF6 3080 aa11.85□□□□□ -0.51
RPSA-208ENST00000487876 CACNA1DQ01668 2161 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 MED12Q93074 2177 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 WDR91A4D1P6 747 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 MYO1GB0I1T2 1018 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 NPIPB8E9PQR5 432 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 PRRG2O14669 202 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 LYPLA1O75608 230 aaPredicted RBP11.84□□□□□ -0.51
RPSA-208ENST00000487876 CHEK2O96017 543 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 IGHG3P01860 377 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 ABCB1P08183 1280 aaPredicted RBP11.84□□□□□ -0.51
RPSA-208ENST00000487876 ESRRAP11474 423 aaPredicted RBP11.84□□□□□ -0.51
RPSA-208ENST00000487876 DCTP40126 519 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 NCBP2P52298 156 aaKnown RBP eCLIP11.84□□□□□ -0.512e-20■■■■□ 20.5
RPSA-208ENST00000487876 CORO7P57737 925 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 HYAL4Q2M3T9 481 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 RFTN2Q52LD8 501 aaPredicted RBP11.84□□□□□ -0.51
RPSA-208ENST00000487876 EMC4Q5J8M3 183 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 ARHGAP11AQ6P4F7 1023 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 TMEM107Q6UX40 140 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 NPSR1Q6W5P4 371 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 RGS9BPQ6ZS82 235 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 RNF165Q6ZSG1 346 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 MRGPRGQ86SM5 289 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 FAM9CQ8IZT9 166 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 RPRMLQ8N4K4 120 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 SPPL2AQ8TCT8 520 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 OMA1Q96E52 524 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 LCORQ96JN0 433 aaPredicted RBP11.84□□□□□ -0.51
RPSA-208ENST00000487876 FCRL1Q96LA6 429 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 RILPQ96NA2 401 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 DMRTA2Q96SC8 542 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 DOHHQ9BU89 302 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 ZNF395Q9H8N7 513 aaPredicted RBP11.84□□□□□ -0.51
RPSA-208ENST00000487876 ZFP64Q9NPA5 681 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 CNIH4Q9P003 139 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 SENP1Q9P0U3 644 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 BAIAP2L1Q9UHR4 511 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 ZDHHC2Q9UIJ5 367 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 BOKQ9UMX3 212 aaPredicted RBP11.84□□□□□ -0.51
RPSA-208ENST00000487876 CFL2Q9Y281 166 aa11.84□□□□□ -0.51
RPSA-208ENST00000487876 CSMD1Q96PZ7 3565 aa11.83□□□□□ -0.52
RPSA-208ENST00000487876 ARHGAP21Q5T5U3 1957 aa11.83□□□□□ -0.52
RPSA-208ENST00000487876 CAPN14A8MX76 684 aa11.83□□□□□ -0.52
RPSA-208ENST00000487876 NPIPA2E9PIF3 369 aa11.83□□□□□ -0.52
RPSA-208ENST00000487876 NPIPA3F8WFD2 350 aa11.83□□□□□ -0.52
RPSA-208ENST00000487876 TP53I11O14683 189 aa11.83□□□□□ -0.52
RPSA-208ENST00000487876 CTIFO43310 598 aaKnown RBP11.83□□□□□ -0.52
RPSA-208ENST00000487876 AKAP10O43572 662 aa11.83□□□□□ -0.52
RPSA-208ENST00000487876 ITM2AO43736 263 aa11.83□□□□□ -0.52
RPSA-208ENST00000487876 TRIM3O75382 744 aaPredicted RBP11.83□□□□□ -0.52
RPSA-208ENST00000487876 SKAP2O75563 359 aaPredicted RBP11.83□□□□□ -0.52
RPSA-208ENST00000487876 PPM1BO75688 479 aa11.83□□□□□ -0.52
RPSA-208ENST00000487876 FGF4P08620 206 aa11.83□□□□□ -0.52
RPSA-208ENST00000487876 CT45A8P0DMV1 189 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms