RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 CAMK2AQ9UQM7 478 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 ARHGAP21Q5T5U3 1957 aa11.14□□□□□ -0.63
VPS16-208ENST00000487461 ZFHX3Q15911 3703 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 MED12Q93074 2177 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 GOLGA6L10A6NI86 522 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 DVL2O14641 736 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 ICOSLGO75144 302 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 OR4F21O95013 312 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 IL2RAP01589 272 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 CHN1P15882 459 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 DRD5P21918 477 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 ECHS1P30084 290 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 EMDP50402 254 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 ASCL1P50553 236 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 AGFG1P52594 562 aaKnown RBP11.13□□□□□ -0.63
VPS16-208ENST00000487461 NAGLUP54802 743 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 CLCQ05315 142 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 LTB4RQ15722 352 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 WHAMMP3Q1A5X7 153 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 FBXL19-AS1Q494R0 122 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 UNC50Q53HI1 259 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 TCHHL1Q5QJ38 904 aaPredicted RBP11.13□□□□□ -0.63
VPS16-208ENST00000487461 ANGPTL8Q6UXH0 198 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 TAOK1Q7L7X3 1001 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 YRDCQ86U90 279 aaKnown RBP11.13□□□□□ -0.63
VPS16-208ENST00000487461 C1orf52Q8N6N3 182 aaKnown RBP11.13□□□□□ -0.63
VPS16-208ENST00000487461 NOA1Q8NC60 698 aaKnown RBP11.13□□□□□ -0.63
VPS16-208ENST00000487461 FAM83FQ8NEG4 500 aaPredicted RBP11.13□□□□□ -0.63
VPS16-208ENST00000487461 OR52R1Q8NGF1 315 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 OR1J4Q8NGS1 313 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 ABTB1Q969K4 478 aaPredicted RBP11.13□□□□□ -0.63
VPS16-208ENST00000487461 KLHL29Q96CT2 875 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 OMA1Q96E52 524 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 HSPBAP1Q96EW2 488 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 LCORQ96JN0 433 aaPredicted RBP11.13□□□□□ -0.63
VPS16-208ENST00000487461 TRIB1Q96RU8 372 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 HBEGFQ99075 208 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 FMO2Q99518 471 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 C1QTNF3Q9BXJ4 246 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 TSPYL1Q9H0U9 437 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 METTL7AQ9H8H3 244 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 RASSF1Q9NS23 344 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 CCM2LQ9NUG4 571 aaPredicted RBP11.13□□□□□ -0.63
VPS16-208ENST00000487461 HEY2Q9UBP5 337 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 FETUBQ9UGM5 382 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 TRPS1Q9UHF7 1281 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 PSME2Q9UL46 239 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 CFL2Q9Y281 166 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 PLLPQ9Y342 182 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 MPDZO75970 2070 aa11.13□□□□□ -0.63
VPS16-208ENST00000487461 CD8B2A6NJW9 211 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 MANBAO00462 879 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 SNPHO15079 494 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 ACOX3O15254 700 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 CDH16O75309 829 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 UGT2B11O75310 529 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 NME6O75414 186 aaPredicted RBP11.12□□□□□ -0.63
VPS16-208ENST00000487461 SNRPAP09012 282 aaKnown RBP11.12□□□□□ -0.63
VPS16-208ENST00000487461 PCSK2P16519 638 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 CNTFP26441 200 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 PEX19P40855 299 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 PPICP45877 212 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 ALDH9A1P49189 494 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 TRA2BP62995 288 aaKnown RBP11.12□□□□□ -0.63
VPS16-208ENST00000487461 SF3B4Q15427 424 aaKnown RBP eCLIP11.12□□□□□ -0.63
VPS16-208ENST00000487461 TEX35Q5T0J7 233 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 SLC30A6Q6NXT4 461 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 TMEM81Q6P7N7 255 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 CCDC116Q8IYX3 515 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 WDSUB1Q8N9V3 476 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 FAM222BQ8WU58 562 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 NINJ1Q92982 152 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 CNRIP1Q96F85 164 aaPredicted RBP11.12□□□□□ -0.63
VPS16-208ENST00000487461 FOXC2Q99958 501 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 FAIM2Q9BWQ8 316 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 CXXC4Q9H2H0 198 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 CLEC4MQ9H2X3 399 aaPredicted RBP11.12□□□□□ -0.63
VPS16-208ENST00000487461 CALHM2Q9HA72 323 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 GALNT9Q9HCQ5 603 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 NMRK1Q9NWW6 199 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 EHD3Q9NZN3 535 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 TMEM216Q9P0N5 145 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 VPS29Q9UBQ0 182 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 ST6GALNAC2Q9UJ37 374 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 UTS2RQ9UKP6 389 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 ZNF780BQ9Y6R6 833 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 ITPR3Q14573 2671 aa11.12□□□□□ -0.63
VPS16-208ENST00000487461 ANKHD1Q8IWZ3 2542 aaKnown RBP11.11□□□□□ -0.63
VPS16-208ENST00000487461 KIAA1549Q9HCM3 1950 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 A0A087WUV0 522 aaPredicted RBP11.11□□□□□ -0.63
VPS16-208ENST00000487461 MBD3L4A6NDZ8 208 aaPredicted RBP11.11□□□□□ -0.63
VPS16-208ENST00000487461 MBD3L3A6NE82 208 aaPredicted RBP11.11□□□□□ -0.63
VPS16-208ENST00000487461 MBD3L5A6NJ08 208 aaPredicted RBP11.11□□□□□ -0.63
VPS16-208ENST00000487461 A6NNC1 897 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 TO15178 435 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 DLX3O60479 287 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 ACTL6AO96019 429 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 CTSSP25774 331 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 GCAP28676 217 aa11.11□□□□□ -0.63
VPS16-208ENST00000487461 SLCO1A2P46721 670 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms