RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 GALPQ9UBC7 116 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 ZFP69BQ9UJL9 534 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 ZNF180Q9UJW8 692 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 CHMP2BQ9UQN3 213 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 RNF115Q9Y4L5 304 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 CADP27708 2225 aa10.51□□□□□ -0.73
TRIM56-204ENST00000487252 TRBC2A0A5B9 178 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 PLOD2O00469 737 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 OR1F1O43749 312 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 ETHE1O95571 254 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 IGKV3-11P04433 115 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 CCDC166P0CW27 439 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 CDH1P12830 882 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 KRT15P19012 456 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 DPP4P27487 766 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 SERPINB3P29508 390 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 AHRP35869 848 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 KCNJ5P48544 419 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 RUNX2Q13950 521 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 GUSBP1Q15486 140 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 PDK4Q16654 411 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 ZNF672Q499Z4 452 aaPredicted RBP10.5□□□□□ -0.73
TRIM56-204ENST00000487252 CGB2Q6NT52 195 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 SEZ6L2Q6UXD5 910 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 GRAMD2AQ8IUY3 354 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 ZNF595Q8IYB9 648 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 MPP5Q8N3R9 675 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 CNEP1R1Q8N9A8 125 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 BANPQ8N9N5 519 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 ATL1Q8WXF7 558 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 NEUROG1Q92886 237 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 PEX13Q92968 403 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 RILPQ96NA2 401 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 ZNF747Q9BV97 191 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 KLHL4Q9C0H6 718 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 KLHL31Q9H511 634 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 MANSC1Q9H8J5 431 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 CATSPERZQ9NTU4 200 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 WWOXQ9NZC7 414 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 HEY2Q9UBP5 337 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 DLGAP4Q9Y2H0 992 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 CMYA5Q8N3K9 4069 aa10.5□□□□□ -0.73
TRIM56-204ENST00000487252 IQANK1A0A1B0GTG1 560 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 FAM159BA6NKW6 160 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 C17orf105B2RV13 164 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 CYR61O00622 381 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 TM9SF1O15321 606 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 CD3EAPO15446 510 aaKnown RBP10.49□□□□□ -0.73
TRIM56-204ENST00000487252 CTNSO60931 367 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 NIPSNAP2O75323 286 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 SPAG7O75391 227 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 IFNA16P05015 189 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 DHRS4L1P0CG22 281 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 NPPBP16860 134 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 LHX2P50458 406 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 GFRA1P56159 465 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 CLDN18P56856 261 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 IRX1P78414 480 aaPredicted RBP10.49□□□□□ -0.73
TRIM56-204ENST00000487252 SRYQ05066 204 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 OCLNQ16625 522 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 PARP6Q2NL67 630 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 GALNTL6Q49A17 601 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 BICRALQ6AI39 1079 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 TIGD3Q6B0B8 471 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 SHISA2Q6UWI4 295 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 ENPP6Q6UWR7 440 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 STAC2Q6ZMT1 411 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 SPATA21Q7Z572 469 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 CLNKQ7Z7G1 428 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 YRDCQ86U90 279 aaKnown RBP10.49□□□□□ -0.73
TRIM56-204ENST00000487252 PACS2Q86VP3 889 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 CNPY4Q8N129 248 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 ZNF525Q8N782 197 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 OR52K1Q8NGK4 314 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 DIO2Q92813 273 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 TMEM41AQ96HV5 264 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 ZNF845Q96IR2 970 aaPredicted RBP10.49□□□□□ -0.73
TRIM56-204ENST00000487252 PRR14Q9BWN1 585 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 NPLQ9BXD5 320 aaPredicted RBP10.49□□□□□ -0.73
TRIM56-204ENST00000487252 OR10A4Q9H209 315 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 MKS1Q9NXB0 559 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 PTBP2Q9UKA9 531 aaKnown RBP10.49□□□□□ -0.73
TRIM56-204ENST00000487252 GRID1Q9ULK0 1009 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 SLC12A4Q9UP95 1085 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 ARL2BPQ9Y2Y0 163 aa10.49□□□□□ -0.73
TRIM56-204ENST00000487252 URADA6NGE7 173 aa10.48□□□□□ -0.73
TRIM56-204ENST00000487252 VWC2LB2RUY7 222 aa10.48□□□□□ -0.73
TRIM56-204ENST00000487252 DNAJC8O75937 253 aaPredicted RBP10.48□□□□□ -0.73
TRIM56-204ENST00000487252 STK10O94804 968 aaKnown RBP10.48□□□□□ -0.73
TRIM56-204ENST00000487252 APRTP07741 180 aa10.48□□□□□ -0.73
TRIM56-204ENST00000487252 ZNF708P17019 499 aa10.48□□□□□ -0.73
TRIM56-204ENST00000487252 KRT4P19013 534 aa10.48□□□□□ -0.73
TRIM56-204ENST00000487252 SCTRP47872 440 aa10.48□□□□□ -0.73
TRIM56-204ENST00000487252 CCR8P51685 355 aa10.48□□□□□ -0.73
TRIM56-204ENST00000487252 RAB38P57729 211 aa10.48□□□□□ -0.73
TRIM56-204ENST00000487252 PRAMEP78395 509 aa10.48□□□□□ -0.73
TRIM56-204ENST00000487252 SPRED3Q2MJR0 410 aa10.48□□□□□ -0.73
TRIM56-204ENST00000487252 KBTBD12Q3ZCT8 623 aa10.48□□□□□ -0.73
TRIM56-204ENST00000487252 AWAT1Q58HT5 328 aa10.48□□□□□ -0.73
TRIM56-204ENST00000487252 NCMAPQ5T1S8 102 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms