RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 EDN3P14138 238 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 DDX5P17844 614 aaKnown RBP12.14□□□□□ -0.47
SF1-216ENST00000486867 LBPP18428 481 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 HPCAL1P37235 193 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 MAP3K8P41279 467 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 NCBP2P52298 156 aaKnown RBP eCLIP12.14□□□□□ -0.47
SF1-216ENST00000486867 TMEM81Q6P7N7 255 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 IL20RBQ6UXL0 311 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 ATCAYQ86WG3 371 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 SIAH3Q8IW03 269 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 WDR75Q8IWA0 830 aaKnown RBP12.14□□□□□ -0.47
SF1-216ENST00000486867 TAGAPQ8N103 731 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 NATD1Q8N6N6 113 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 ST6GALNAC3Q8NDV1 305 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 OR52R1Q8NGF1 315 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 CLHC1Q8NHS4 586 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 PIWIL2Q8TC59 973 aaKnown RBP12.14□□□□□ -0.47
SF1-216ENST00000486867 KAT2AQ92830 837 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 ELP4Q96EB1 424 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 HSPBAP1Q96EW2 488 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 ZBED6CLQ96FA7 236 aaPredicted RBP12.14□□□□□ -0.47
SF1-216ENST00000486867 GAL3ST4Q96RP7 486 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 SECISBP2Q96T21 854 aaKnown RBP12.14□□□□□ -0.47
SF1-216ENST00000486867 C1orf50Q9BV19 199 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 NUF2Q9BZD4 464 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 NXF5Q9H1B4 397 aaKnown RBP12.14□□□□□ -0.47
SF1-216ENST00000486867 KLHL1Q9NR64 748 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 DEPPQ9NTK1 212 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 EIF3LQ9Y262 564 aaKnown RBP12.14□□□□□ -0.47
SF1-216ENST00000486867 NPFFR2Q9Y5X5 522 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 CHCHD2Q9Y6H1 151 aaPredicted RBP12.14□□□□□ -0.47
SF1-216ENST00000486867 PTPN13Q12923 2485 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 PCNX1Q96RV3 2341 aa12.14□□□□□ -0.47
SF1-216ENST00000486867 DOPEY2Q9Y3R5 2298 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 PHF3Q92576 2039 aaKnown RBP12.13□□□□□ -0.47
SF1-216ENST00000486867 ANKRD33BA6NCL7 494 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 FRG2CA6NGY1 282 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 UPK1AO00322 258 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 AKAP10O43572 662 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 LRATO95237 230 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 CT45A8P0DMV1 189 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 CT45A9P0DMV2 189 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 G6PDP11413 515 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 MST1P26927 711 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 NR0B1P51843 470 aaKnown RBP12.13□□□□□ -0.47
SF1-216ENST00000486867 DIO3P55073 304 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 MAPKAPK3Q16644 382 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 HYAL4Q2M3T9 481 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 CT45A2Q5DJT8 189 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 EXOSC6Q5RKV6 272 aaKnown RBP12.13□□□□□ -0.47
SF1-216ENST00000486867 ANKRD26P1Q6NSI1 321 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 ZNF551Q7Z340 670 aaPredicted RBP12.13□□□□□ -0.47
SF1-216ENST00000486867 MAVSQ7Z434 540 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 SULF2Q8IWU5 870 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 FAM98AQ8NCA5 519 aaKnown RBP12.13□□□□□ -0.47
SF1-216ENST00000486867 ZFP28Q8NHY6 868 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 RNF138Q8WVD3 245 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 STON2Q8WXE9 905 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 GFM2Q969S9 779 aaKnown RBP12.13□□□□□ -0.47
SF1-216ENST00000486867 CIDECQ96AQ7 238 aaPredicted RBP12.13□□□□□ -0.47
SF1-216ENST00000486867 LCORQ96JN0 433 aaPredicted RBP12.13□□□□□ -0.47
SF1-216ENST00000486867 ITPAQ9BY32 194 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 ACBD3Q9H3P7 528 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 PROK2Q9HC23 129 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 SIRT3Q9NTG7 399 aaPredicted RBP12.13□□□□□ -0.47
SF1-216ENST00000486867 OLAHQ9NV23 265 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 CNIH4Q9P003 139 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 BCAP29Q9UHQ4 241 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 ERVK-11Q9UQG0 969 aa12.13□□□□□ -0.47
SF1-216ENST00000486867 NCOA6Q14686 2063 aaPredicted RBP12.13□□□□□ -0.47
SF1-216ENST00000486867 DOPEY1Q5JWR5 2465 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 TTC36A6NLP5 189 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 CAPN14A8MX76 684 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 KLRC4-KLRK1H3BQV0 150 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 PEX1O43933 1283 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 COQ9O75208 318 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 GLSO94925 669 aaPredicted RBP12.12□□□□□ -0.47
SF1-216ENST00000486867 TGDSO95455 350 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 ALDOCP09972 364 aaKnown RBP12.12□□□□□ -0.47
SF1-216ENST00000486867 CCL3P10147 92 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 LAMP1P11279 417 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 CNR1P21554 472 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 ABCD3P28288 659 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 MC3RP41968 323 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 TMED10P49755 219 aaKnown RBP12.12□□□□□ -0.47
SF1-216ENST00000486867 NRG3P56975 720 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 PSG6Q00889 435 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 PMP22Q01453 160 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 FOXO1Q12778 655 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 RPS6KA2Q15349 733 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 RNFT1Q5M7Z0 435 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 HLA-DQA1Q5Y7H0 255 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 BNC2Q6ZN30 1099 aaPredicted RBP12.12□□□□□ -0.47
SF1-216ENST00000486867 SPATA19Q7Z5L4 167 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.12□□□□□ -0.47
SF1-216ENST00000486867 FBXW8Q8N3Y1 598 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 KRTCAP2Q8N6L1 136 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 OR2M7Q8NG81 312 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 OR7A2PQ8NGA2 310 aa12.12□□□□□ -0.47
SF1-216ENST00000486867 OR8J2Q8NGG1 315 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms