RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ZSCAN32Q9NX65 697 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 NDUFAF4Q9P032 175 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 KCMF1Q9P0J7 381 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 PRELID1Q9Y255 219 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 CLCA1A8K7I4 914 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 TMX2-CTNND1H3BSU7 103 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 ANKRD28O15084 1053 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 TMPRSS11DO60235 418 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 MOSPD3O75425 235 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 WISP3O95389 354 aaPredicted RBP12.5□□□□□ -0.41
HMGN1-216ENST00000486741 CHRNEQ04844 493 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 ENPP2Q13822 863 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 ANGPT1Q15389 498 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 TMEM52BQ4KMG9 183 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 FAM71E1Q6IPT2 247 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 ADAMTSL4Q6UY14 1074 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 BCDIN3DQ7Z5W3 292 aaKnown RBP12.5□□□□□ -0.41
HMGN1-216ENST00000486741 FGD2Q7Z6J4 655 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 SLC22A16Q86VW1 577 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 MARCH9Q86YJ5 346 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 OR2L3Q8NG85 312 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 C9orf43Q8TAL5 461 aaPredicted RBP12.5□□□□□ -0.41
HMGN1-216ENST00000486741 THAP3Q8WTV1 239 aaPredicted RBP12.5□□□□□ -0.41
HMGN1-216ENST00000486741 GATAD2BQ8WXI9 593 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 OR1E3Q8WZA6 343 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 HDAC8Q9BY41 377 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 CRISPLD2Q9H0B8 497 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 VNN3Q9NY84 501 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 TAAR2Q9P1P5 351 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 TBC1D29Q9UFV1 150 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 PEX16Q9Y5Y5 336 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 PRAMEF4O60810 478 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 GASTP01350 101 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 ARAFP10398 606 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 OPRL1P41146 370 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 BCL6P41182 706 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 GCGRP47871 477 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 ADARB1P78563 741 aaKnown RBP12.5□□□□□ -0.41
HMGN1-216ENST00000486741 SPCS2Q15005 226 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 PRAMEF9Q5VWM5 478 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 FCRLBQ6BAA4 426 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 FRMPD2BQ6IN97 320 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 POMGNT2Q8NAT1 580 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 ASPNQ9BXN1 380 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 OR51E2Q9H255 320 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 GLIPR2Q9H4G4 154 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 NTN4Q9HB63 628 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 NKIRAS2Q9NYR9 191 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 MED31Q9Y3C7 131 aa12.5□□□□□ -0.41
HMGN1-216ENST00000486741 J3QLW9 94 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 GREM1O60565 184 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 SEMA3DO95025 777 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 CFIP05156 583 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 ZNF19P17023 458 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 OPRD1P41143 372 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 SLC19A1P41440 591 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 POU6F2P78424 691 aaPredicted RBP12.49□□□□□ -0.41
HMGN1-216ENST00000486741 SPHARQ15513 63 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 B3GNT7Q8NFL0 401 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 OR51L1Q8NGJ5 315 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 OR8J1Q8NGP2 316 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 CDS1Q92903 461 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 MRPL48Q96GC5 212 aaKnown RBP12.49□□□□□ -0.41
HMGN1-216ENST00000486741 RHNO1Q9BSD3 238 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 PLA2G2FQ9BZM2 168 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 EPHX3Q9H6B9 360 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 Q9N2J8 555 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 TIGARQ9NQ88 270 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 IGLV3-16A0A075B6K0 115 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 A0A1W2PPK0 400 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 FABP12A6NFH5 140 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 STX11O75558 287 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 C1QCP02747 245 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 CISD3P0C7P0 127 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 SPTBP11277 2137 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 BMP8BP34820 402 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 PPP2CBP62714 309 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 PPP2CAP67775 309 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 CTU2Q2VPK5 515 aaKnown RBP12.49□□□□□ -0.41
HMGN1-216ENST00000486741 LRIT3Q3SXY7 679 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 IDNKQ5T6J7 187 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 FRRS1Q6ZNA5 592 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 NCCRP1Q6ZVX7 275 aaPredicted RBP12.49□□□□□ -0.41
HMGN1-216ENST00000486741 BMP8AQ7Z5Y6 402 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 CRELD1Q96HD1 420 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 METTL2AQ96IZ6 378 aaKnown RBP12.49□□□□□ -0.41
HMGN1-216ENST00000486741 ZBTB20Q9HC78 741 aaPredicted RBP12.49□□□□□ -0.41
HMGN1-216ENST00000486741 C14orf119Q9NWQ9 140 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 CFL2Q9Y281 166 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 ZNF638Q14966 1978 aaKnown RBP12.49□□□□□ -0.41
HMGN1-216ENST00000486741 CCRL2O00421 344 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 KIAA0513O60268 411 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 ENTPD6O75354 484 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 JRKO75564 520 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 ZNF12P17014 697 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 RAB25P57735 213 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 LGALS3BPQ08380 585 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 MZT2AQ6P582 158 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 B3GLCTQ6Y288 498 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 PRSS48Q7RTY5 328 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms