RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 OR4D11Q8NGI4 311 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 SLC7A13Q8TCU3 470 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 RAET1EQ8TD07 263 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 GTF3C2Q8WUA4 911 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-208ENST00000486641 ASB11Q8WXH4 323 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 ADAMTS14Q8WXS8 1223 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 HERVK_113Q902F9 699 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 MYO19Q96H55 970 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 SUSD3Q96L08 255 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 SLC38A2Q96QD8 506 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 SARGQ9BW04 601 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 CACNG6Q9BXT2 260 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 ZNF436Q9C0F3 470 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-208ENST00000486641 BHLHE41Q9C0J9 482 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-208ENST00000486641 SAV1Q9H4B6 383 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-208ENST00000486641 PCDHB16Q9NRJ7 776 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 NLGN3Q9NZ94 848 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 POMT2Q9UKY4 750 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 GPR52Q9Y2T5 361 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 PPP2R3BQ9Y5P8 575 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 TCRBV16S1A1N1A0A5B0 115 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 OR5K4A6NMS3 321 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 WDPCPO95876 746 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 HPXP02790 462 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 LPLP06858 475 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 H2AFB2P0C5Z0 115 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 GAAP10253 952 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 RAB3AP20336 220 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 MTNR1AP48039 350 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 PSEN2P49810 448 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 ERVFC1P60507 584 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 RING1Q06587 406 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 ZNF155Q12901 538 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-208ENST00000486641 MBTPS1Q14703 1052 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 PRSS53Q2L4Q9 553 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 RNASE12Q5GAN4 147 aaKnown RBP10.06□□□□□ -0.8
CCDC171-208ENST00000486641 TECPR1Q7Z6L1 1165 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 PLEKHH3Q7Z736 793 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 LRRC28Q86X40 367 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-208ENST00000486641 C7orf57Q8NEG2 295 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 ACOT12Q8WYK0 555 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 SMG7Q92540 1137 aaKnown RBP10.06□□□□□ -0.8
CCDC171-208ENST00000486641 ASIC4Q96FT7 647 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 PDXPQ96GD0 296 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 NPAS1Q99742 590 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 IFT22Q9H7X7 185 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 SGK2Q9HBY8 427 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 ZNF304Q9HCX3 659 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 OR6C2Q9NZP2 312 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 MBD1Q9UIS9 605 aaPredicted RBP10.06□□□□□ -0.8
CCDC171-208ENST00000486641 FBXW2Q9UKT8 454 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 SPATA2Q9UM82 520 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 ZFR2Q9UPR6 939 aaKnown RBP10.06□□□□□ -0.8
CCDC171-208ENST00000486641 LIPT1Q9Y234 373 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 TMEM5Q9Y2B1 443 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 SLC9A8Q9Y2E8 581 aa10.06□□□□□ -0.8
CCDC171-208ENST00000486641 EXOSC1Q9Y3B2 195 aaKnown RBP10.06□□□□□ -0.8
CCDC171-208ENST00000486641 SCN8AQ9UQD0 1980 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 ZNF98A6NK75 572 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 POM121CA8CG34 1229 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 HNRNPCL2B2RXH8 293 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 TEX46H3BTG2 121 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 CXCL11O14625 94 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 ACSL4O60488 711 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 SOX30O94993 753 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 EPHX1P07099 455 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 DRD2P14416 443 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 F8A1P23610 371 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 SLC1A3P43003 542 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 BLVRAP53004 296 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 TSPAN5P62079 268 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 CDK5Q00535 292 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 TAP2Q03519 686 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 MRPL58Q14197 206 aaKnown RBP10.05□□□□□ -0.8
CCDC171-208ENST00000486641 ZNF169Q14929 603 aaPredicted RBP10.05□□□□□ -0.8
CCDC171-208ENST00000486641 PRAMEF19Q5SWL8 479 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 LYPLAL1Q5VWZ2 237 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 RNF219Q5W0B1 726 aaPredicted RBP10.05□□□□□ -0.8
CCDC171-208ENST00000486641 VASNQ6EMK4 673 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 RETSATQ6NUM9 610 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 ATRAIDQ6UW56 229 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 C16orf59Q7L2K0 433 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 OAFQ86UD1 273 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 SIAH3Q8IW03 269 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 NXPE1Q8N323 547 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 SAMD12Q8N8I0 201 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 ZNF527Q8NB42 609 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 MOSPD2Q8NHP6 518 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 WDR48Q8TAF3 677 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 ADAMTS19Q8TE59 1207 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 GPA33Q99795 319 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 FUZQ9BT04 418 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 SLC6A15Q9H2J7 730 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 REEP4Q9H6H4 257 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 SLAMF7Q9NQ25 335 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 GULP1Q9UBP9 304 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 LHX3Q9UBR4 397 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 NPTNQ9Y639 398 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 OTOFQ9HC10 1997 aa10.05□□□□□ -0.8
CCDC171-208ENST00000486641 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms