RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 DUSP8Q13202 625 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 SERTAD2Q14140 314 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 COL28A1Q2UY09 1125 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 COX20Q5RI15 118 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 FAM199XQ6PEV8 388 aaPredicted RBP10.57□□□□□ -0.72
SND1-212ENST00000485871 IGF2-ASQ6U949 168 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 TMEM107Q6UX40 140 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 OR2L13Q8N349 312 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 TRIML2Q8N7C3 387 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 TMEM102Q8N9M5 508 aaPredicted RBP10.57□□□□□ -0.72
SND1-212ENST00000485871 SIMC1Q8NDZ2 872 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 OR52E4Q8NGH9 312 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 HOXB13Q92826 284 aaPredicted RBP10.57□□□□□ -0.72
SND1-212ENST00000485871 KAT2AQ92830 837 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 PPWD1Q96BP3 646 aaKnown RBP10.57□□□□□ -0.72
SND1-212ENST00000485871 PTCHD1Q96NR3 888 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 YIPF2Q9BWQ6 316 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 ALOXE3Q9BYJ1 711 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 PCDHAC1Q9H158 963 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 WDR54Q9H977 334 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 ANKRA2Q9H9E1 313 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 CXorf21Q9HAI6 301 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 SEMA3GQ9NS98 782 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 IFT80Q9P2H3 777 aaPredicted RBP10.57□□□□□ -0.72
SND1-212ENST00000485871 PCSK5Q92824 1860 aa10.57□□□□□ -0.72
SND1-212ENST00000485871 DMXL2Q8TDJ6 3036 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 GCN1Q92616 2671 aaKnown RBP10.56□□□□□ -0.72
SND1-212ENST00000485871 CDRT15L2A8MXV6 281 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 FAM220BPB1ANY3 271 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.56□□□□□ -0.72
SND1-212ENST00000485871 TERTO14746 1132 aaKnown RBP10.56□□□□□ -0.72
SND1-212ENST00000485871 ARPC2O15144 300 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 EMC8O43402 210 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 TNFRSF21O75509 655 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 KLF7O75840 302 aaPredicted RBP10.56□□□□□ -0.72
SND1-212ENST00000485871 TNFSF15O95150 251 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 CBX7O95931 251 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 CLPSP04118 112 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 ATXN8OSP0DMR3 200 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 NT5EP21589 574 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 PPIBP23284 216 aaKnown RBP10.56□□□□□ -0.72
SND1-212ENST00000485871 FASP25445 335 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 GPC1P35052 558 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 OCA2Q04671 838 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 VAC14Q08AM6 782 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 BIKQ13323 160 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 CAMK2BQ13554 666 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 RGNQ15493 299 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 ADRM1Q16186 407 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 MINDY4Q4G0A6 757 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 TRMT12Q53H54 448 aaKnown RBP10.56□□□□□ -0.72
SND1-212ENST00000485871 LPCAT4Q643R3 524 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 C6orf120Q7Z4R8 191 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 SERPINA11Q86U17 422 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 PTOV1Q86YD1 416 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 GALNT15Q8N3T1 639 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 ANKFN1Q8N957 763 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 FAM156AQ8NDB6 213 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 PAPD5Q8NDF8 572 aaKnown RBP10.56□□□□□ -0.72
SND1-212ENST00000485871 OR10A6Q8NH74 314 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 PNPT1Q8TCS8 783 aaKnown RBP10.56□□□□□ -0.72
SND1-212ENST00000485871 MIPOL1Q8TD10 442 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 DOK4Q8TEW6 326 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 MR1Q95460 341 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 EME1Q96AY2 570 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 PKP2Q99959 881 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 PELOQ9BRX2 385 aaKnown RBP10.56□□□□□ -0.72
SND1-212ENST00000485871 SOX17Q9H6I2 414 aaPredicted RBP10.56□□□□□ -0.72
SND1-212ENST00000485871 POLR1BQ9H9Y6 1135 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 ASCL3Q9NQ33 180 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 ZCCHC3Q9NUD5 404 aaKnown RBP10.56□□□□□ -0.72
SND1-212ENST00000485871 PTGFRNQ9P2B2 879 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 MKL2Q9ULH7 1088 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 C19orf53Q9UNZ5 99 aaPredicted RBP10.56□□□□□ -0.72
SND1-212ENST00000485871 SNX8Q9Y5X2 465 aa10.56□□□□□ -0.72
SND1-212ENST00000485871 IDSB3KWA1 339 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 HRKO00198 91 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 KRT75O95678 551 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 NUDT7P0C024 238 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 ATP6V1B2P21281 511 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 MSX2P35548 267 aaPredicted RBP10.55□□□□□ -0.72
SND1-212ENST00000485871 MAP3K8P41279 467 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 MAN2A2P49641 1150 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 AQP4P55087 323 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 OR4D2P58180 307 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 GABREP78334 506 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 EEF1A2Q05639 463 aaKnown RBP10.55□□□□□ -0.72
SND1-212ENST00000485871 FUT7Q11130 342 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 STX4Q12846 297 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 FADDQ13158 208 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 NCF4Q15080 339 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 SFT2D3Q587I9 215 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 TBCELQ5QJ74 424 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.55□□□□□ -0.72
SND1-212ENST00000485871 INTS11Q5TA45 600 aaKnown RBP10.55□□□□□ -0.72
SND1-212ENST00000485871 TMEM205Q6UW68 189 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 C6orf15Q6UXA7 325 aaPredicted RBP10.55□□□□□ -0.72
SND1-212ENST00000485871 SHISA6Q6ZSJ9 500 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 LANCL3Q6ZV70 420 aa10.55□□□□□ -0.72
SND1-212ENST00000485871 RNF130Q86XS8 419 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms