RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 DPP3Q9NY33 737 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 PLK2Q9NYY3 685 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 DLGAP2Q9P1A6 1054 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 ARMCX1Q9P291 453 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 PTGFRNQ9P2B2 879 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 CHRNA9Q9UGM1 479 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 CRLS1Q9UJA2 301 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 ZNF229Q9UJW7 825 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 MKLN1Q9UL63 735 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 RAB23Q9ULC3 237 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 TMCO1Q9UM00 188 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 PRPF19Q9UMS4 504 aaKnown RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 CDY1Q9Y6F8 540 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 WDR90Q96KV7 1748 aa3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 BRCA1P38398 1863 aaKnown RBP3.79□□□□□ -1.8
PRPF38B-205ENST00000485810 TRAV25A0A0B4J276 109 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 A0A1W2PQM1 296 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 C17orf102A2RUQ5 167 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 NPIPB13A6NJU9 1138 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 ASB14A6NK59 587 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 TMEM233B4DJY2 109 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 NPIPB4C9JG80 1138 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 LEFTY2O00292 366 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 PIRO00625 290 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 ITGB1BP1O14713 200 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 B4GALT5O43286 388 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 B4GAT1O43505 415 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 UGT1A9O60656 530 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 PRAMEF4O60810 478 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 PIAS1O75925 651 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 ZFPL1O95159 310 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 AP2A1O95782 977 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 CXCL10P02778 98 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 LCATP04180 440 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 ALPIP09923 528 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 PTPRFP10586 1907 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 PEPDP12955 493 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 CCL2P13500 99 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 NQO2P16083 231 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 POLR2CP19387 275 aaPredicted RBP3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 ITGAXP20702 1163 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 DDCP20711 480 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 EEF1B2P24534 225 aaKnown RBP3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 ZFP36P26651 326 aaKnown RBP3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 APOBEC3AP31941 199 aaPredicted RBP3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 DCTDP32321 178 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 SPRP35270 261 aaPredicted RBP3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 SERPINB5P36952 375 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 PNPLA4P41247 253 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 MATKP42679 507 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 SLC1A3P43003 542 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 PSMD8P48556 350 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 COL4A4P53420 1690 aaPredicted RBP3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 ABCE1P61221 599 aaKnown RBP3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 RAB11AP62491 216 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 POU6F2P78424 691 aaPredicted RBP3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 HSF2Q03933 536 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 DUSP2Q05923 314 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 RBPJQ06330 500 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 SEMA3BQ13214 749 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 MRPL49Q13405 166 aaKnown RBP3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 ATP1A4Q13733 1029 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 ITGA9Q13797 1035 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 PDE7AQ13946 482 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 ARHGEF7Q14155 803 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 RCAN2Q14206 197 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 CSHL1Q14406 222 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 RAB11BQ15907 218 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 CA9Q16790 459 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 LY6KQ17RY6 165 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 RALGAPA2Q2PPJ7 1873 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 GOLGA7BQ2TAP0 167 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 SLC25A52Q3SY17 297 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 CDONQ4KMG0 1287 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 IQCCQ4KMZ1 466 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 LIN52Q52LA3 116 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 YIF1BQ5BJH7 314 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 N4BP2L1Q5TBK1 243 aaPredicted RBP3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 OGFRL1Q5TC84 451 aaPredicted RBP3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 C1orf146Q5VVC0 180 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 C3orf33Q6P1S2 294 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 ZFP1Q6P2D0 407 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 TMEM88Q6PEY1 159 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 NHLRC1Q6VVB1 395 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 GLDNQ6ZMI3 551 aaPredicted RBP3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 PLEKHG7Q6ZR37 379 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 GPRIN1Q7Z2K8 1008 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 SLC46A3Q7Z3Q1 461 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 MAVSQ7Z434 540 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 SNX20Q7Z614 316 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 TAC4Q86UU9 113 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 VRK2Q86Y07 508 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 CCDC36Q8IYA8 594 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 MARVELD2Q8N4S9 558 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 ZBTB2Q8N680 514 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 CPSF7Q8N684 471 aaKnown RBP3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 RNF148Q8N7C7 305 aa3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.78□□□□□ -1.8
PRPF38B-205ENST00000485810 CLEC1AQ8NC01 280 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms