RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 ELP4Q96EB1 424 aa16.41■□□□□ 0.22
SREBF1-213ENST00000485080 HSPBAP1Q96EW2 488 aa16.41■□□□□ 0.22
SREBF1-213ENST00000485080 LCORQ96JN0 433 aaPredicted RBP16.41■□□□□ 0.22
SREBF1-213ENST00000485080 MAELQ96JY0 434 aaKnown RBP16.41■□□□□ 0.22
SREBF1-213ENST00000485080 VSTM2LQ96N03 204 aa16.41■□□□□ 0.22
SREBF1-213ENST00000485080 FRMD6Q96NE9 622 aa16.41■□□□□ 0.22
SREBF1-213ENST00000485080 BTBD9Q96Q07 612 aa16.41■□□□□ 0.22
SREBF1-213ENST00000485080 PRPF18Q99633 342 aaKnown RBP16.41■□□□□ 0.22
SREBF1-213ENST00000485080 KLHL1Q9NR64 748 aa16.41■□□□□ 0.22
SREBF1-213ENST00000485080 INTS9Q9NV88 658 aaKnown RBP16.41■□□□□ 0.22
SREBF1-213ENST00000485080 SH3BP4Q9P0V3 963 aa16.41■□□□□ 0.22
SREBF1-213ENST00000485080 BCAP29Q9UHQ4 241 aa16.41■□□□□ 0.22
SREBF1-213ENST00000485080 GPR55Q9Y2T6 319 aaPredicted RBP16.41■□□□□ 0.22
SREBF1-213ENST00000485080 KLRC4-KLRK1H3BQV0 150 aa16.4■□□□□ 0.22
SREBF1-213ENST00000485080 ZNF195O14628 629 aa16.4■□□□□ 0.22
SREBF1-213ENST00000485080 COQ9O75208 318 aa16.4■□□□□ 0.22
SREBF1-213ENST00000485080 CBX6O95503 412 aa16.4■□□□□ 0.22
SREBF1-213ENST00000485080 NR0B1P51843 470 aaKnown RBP16.4■□□□□ 0.22
SREBF1-213ENST00000485080 NRG3P56975 720 aa16.4■□□□□ 0.22
SREBF1-213ENST00000485080 RGS9BPQ6ZS82 235 aa16.4■□□□□ 0.22
SREBF1-213ENST00000485080 ZFP62Q8NB50 900 aaPredicted RBP16.4■□□□□ 0.22
SREBF1-213ENST00000485080 ST6GALNAC3Q8NDV1 305 aa16.4■□□□□ 0.22
SREBF1-213ENST00000485080 ZFP28Q8NHY6 868 aa16.4■□□□□ 0.22
SREBF1-213ENST00000485080 PAQR8Q8TEZ7 354 aa16.4■□□□□ 0.22
SREBF1-213ENST00000485080 SECISBP2Q96T21 854 aaKnown RBP16.4■□□□□ 0.22
SREBF1-213ENST00000485080 NXF5Q9H1B4 397 aaKnown RBP16.4■□□□□ 0.22
SREBF1-213ENST00000485080 OLAHQ9NV23 265 aa16.4■□□□□ 0.22
SREBF1-213ENST00000485080 ATAD3AQ9NVI7 634 aa16.4■□□□□ 0.22
SREBF1-213ENST00000485080 TAS2R9Q9NYW1 312 aa16.4■□□□□ 0.22
SREBF1-213ENST00000485080 VPS4AQ9UN37 437 aa16.4■□□□□ 0.22
SREBF1-213ENST00000485080 DTX4Q9Y2E6 619 aa16.4■□□□□ 0.22
SREBF1-213ENST00000485080 UQCRHLA0A096LP55 91 aa16.39■□□□□ 0.21
SREBF1-213ENST00000485080 FRG2CA6NGY1 282 aa16.39■□□□□ 0.21
SREBF1-213ENST00000485080 TTC36A6NLP5 189 aa16.39■□□□□ 0.21
SREBF1-213ENST00000485080 TCP11X1B4DZS4 312 aa16.39■□□□□ 0.21
SREBF1-213ENST00000485080 ATP8B1O43520 1251 aa16.39■□□□□ 0.21
SREBF1-213ENST00000485080 PEX1O43933 1283 aa16.39■□□□□ 0.21
SREBF1-213ENST00000485080 TMED10P49755 219 aaKnown RBP16.39■□□□□ 0.21
SREBF1-213ENST00000485080 TDGF1P3P51864 188 aa16.39■□□□□ 0.21
SREBF1-213ENST00000485080 DIO3P55073 304 aa16.39■□□□□ 0.21
SREBF1-213ENST00000485080 CPTPQ5TA50 214 aa16.39■□□□□ 0.21
SREBF1-213ENST00000485080 ANKRD26P1Q6NSI1 321 aa16.39■□□□□ 0.21
SREBF1-213ENST00000485080 SPATA19Q7Z5L4 167 aa16.39■□□□□ 0.21
SREBF1-213ENST00000485080 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.39■□□□□ 0.21
SREBF1-213ENST00000485080 SULF2Q8IWU5 870 aa16.39■□□□□ 0.21
SREBF1-213ENST00000485080 PSMA8Q8TAA3 256 aa16.39■□□□□ 0.21
SREBF1-213ENST00000485080 ACTRT2Q8TDY3 377 aa16.39■□□□□ 0.21
SREBF1-213ENST00000485080 CKAP2Q8WWK9 683 aa16.39■□□□□ 0.21
SREBF1-213ENST00000485080 CIDECQ96AQ7 238 aaPredicted RBP16.39■□□□□ 0.21
SREBF1-213ENST00000485080 ITPAQ9BY32 194 aa16.39■□□□□ 0.21
SREBF1-213ENST00000485080 BHLHE41Q9C0J9 482 aaPredicted RBP16.39■□□□□ 0.21
SREBF1-213ENST00000485080 CNIH4Q9P003 139 aa16.39■□□□□ 0.21
SREBF1-213ENST00000485080 NPFFR2Q9Y5X5 522 aa16.39■□□□□ 0.21
SREBF1-213ENST00000485080 NUP214P35658 2090 aaPredicted RBP16.39■□□□□ 0.21
SREBF1-213ENST00000485080 ANKRD33BA6NCL7 494 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 UPK1AO00322 258 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 ANKRD28O15084 1053 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 TGDSO95455 350 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 CT45A8P0DMV1 189 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 CT45A9P0DMV2 189 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 LAMP1P11279 417 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 CNR1P21554 472 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 ABCD3P28288 659 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 MC3RP41968 323 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 MANFP55145 182 aaKnown RBP16.38■□□□□ 0.21
SREBF1-213ENST00000485080 CT45A2Q5DJT8 189 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 SLC22A10Q63ZE4 541 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 TMEM81Q6P7N7 255 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 TMEM107Q6UX40 140 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 BNC2Q6ZN30 1099 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-213ENST00000485080 ZNF551Q7Z340 670 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-213ENST00000485080 SIAH3Q8IW03 269 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 FBXW8Q8N3Y1 598 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 KRTCAP2Q8N6L1 136 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 OR7A2PQ8NGA2 310 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 DYDC1Q8WWB3 177 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 HOXB13Q92826 284 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-213ENST00000485080 NTNG2Q96CW9 530 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 PPP1R36Q96LQ0 422 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 MAGEB18Q96M61 343 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 FOLH1BQ9HBA9 442 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 SACM1LQ9NTJ5 587 aa16.38■□□□□ 0.21
SREBF1-213ENST00000485080 MARCOQ9UEW3 520 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-213ENST00000485080 CHCHD2Q9Y6H1 151 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-213ENST00000485080 TP53I11O14683 189 aa16.37■□□□□ 0.21
SREBF1-213ENST00000485080 PMP22Q01453 160 aa16.37■□□□□ 0.21
SREBF1-213ENST00000485080 KCNC4Q03721 635 aa16.37■□□□□ 0.21
SREBF1-213ENST00000485080 RPS6KA2Q15349 733 aa16.37■□□□□ 0.21
SREBF1-213ENST00000485080 HYAL4Q2M3T9 481 aa16.37■□□□□ 0.21
SREBF1-213ENST00000485080 KRTCAP3Q53RY4 240 aa16.37■□□□□ 0.21
SREBF1-213ENST00000485080 MAVSQ7Z434 540 aa16.37■□□□□ 0.21
SREBF1-213ENST00000485080 OR8J2Q8NGG1 315 aa16.37■□□□□ 0.21
SREBF1-213ENST00000485080 CEP70Q8NHQ1 597 aa16.37■□□□□ 0.21
SREBF1-213ENST00000485080 OR5P2Q8WZ92 322 aa16.37■□□□□ 0.21
SREBF1-213ENST00000485080 TESCQ96BS2 214 aa16.37■□□□□ 0.21
SREBF1-213ENST00000485080 ANKRA2Q9H9E1 313 aa16.37■□□□□ 0.21
SREBF1-213ENST00000485080 DEPPQ9NTK1 212 aa16.37■□□□□ 0.21
SREBF1-213ENST00000485080 DDX18Q9NVP1 670 aaKnown RBP16.37■□□□□ 0.21
SREBF1-213ENST00000485080 SPTAN1Q13813 2472 aaKnown RBP16.36■□□□□ 0.21
SREBF1-213ENST00000485080 ERN1O75460 977 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms