RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 LMO7DNF2Z398 122 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 BUB1O43683 1085 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 KIAA0513O60268 411 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 ECE2O60344 883 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 CSDE1O75534 798 aaKnown RBP3.11□□□□□ -1.91
SMC4-215ENST00000484799 DIRAS3O95661 229 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 AK1P00568 194 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 PROS1P07225 676 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 TNNI3P19429 210 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 FUT1P19526 365 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 GLRA1P23415 457 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 FCGR2BP31994 310 aaPredicted RBP3.11□□□□□ -1.91
SMC4-215ENST00000484799 FCGR2CP31995 323 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 HSPA1LP34931 641 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 SLC1A4P43007 532 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 ACADSBP45954 432 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 FHITP49789 147 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 CAPRIN1Q14444 709 aaKnown RBP3.11□□□□□ -1.91
SMC4-215ENST00000484799 EXOSC7Q15024 291 aaKnown RBP3.11□□□□□ -1.91
SMC4-215ENST00000484799 ECSCRQ19T08 205 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 SHROOM1Q2M3G4 852 aaPredicted RBP3.11□□□□□ -1.91
SMC4-215ENST00000484799 ANKDD1AQ495B1 522 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 CMPK2Q5EBM0 449 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 CDC42EP5Q6NZY7 148 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 LCA5Q86VQ0 697 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 CACUL1Q86Y37 369 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 CERS5Q8N5B7 392 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 BCORP1Q8N888 145 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 BANPQ8N9N5 519 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 MINDY2Q8NBR6 621 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 FBXO30Q8TB52 745 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 SSC4DQ8WTU2 575 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 SMPDL3AQ92484 453 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 CXorf58Q96LI9 332 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 ERGIC2Q96RQ1 377 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 WRAP53Q9BUR4 548 aaKnown RBP3.11□□□□□ -1.91
SMC4-215ENST00000484799 CCSER1Q9C0I3 900 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 WWP1Q9H0M0 922 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 TSPY26PQ9H489 355 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 FAM124BQ9H5Z6 455 aaPredicted RBP3.11□□□□□ -1.91
SMC4-215ENST00000484799 FNDC4Q9H6D8 234 aaPredicted RBP3.11□□□□□ -1.91
SMC4-215ENST00000484799 COQ10BQ9H8M1 238 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 ROPN1Q9HAT0 212 aaPredicted RBP3.11□□□□□ -1.91
SMC4-215ENST00000484799 IL1RAPQ9NPH3 570 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 MED17Q9NVC6 651 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.11□□□□□ -1.91
SMC4-215ENST00000484799 ADAM22Q9P0K1 906 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 NYAP2Q9P242 653 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 ATXN10Q9UBB4 475 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 IL20RAQ9UHF4 553 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 DDX49Q9Y6V7 483 aaKnown RBP3.11□□□□□ -1.91
SMC4-215ENST00000484799 KIF25-AS1Q9Y6Z4 181 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 NEDD4P46934 1319 aa3.11□□□□□ -1.91
SMC4-215ENST00000484799 FAM230AA0A1W2PPH8 454 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 TMEM89A2RUT3 159 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 H0Y9J4 135 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 MFN2O95140 757 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 RENP00797 406 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 CALCAP01258 141 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 RRASP10301 218 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 HSPA5P11021 654 aaKnown RBP3.1□□□□□ -1.91
SMC4-215ENST00000484799 MBL2P11226 248 aaPredicted RBP3.1□□□□□ -1.91
SMC4-215ENST00000484799 NCF1P14598 390 aaPredicted RBP3.1□□□□□ -1.91
SMC4-215ENST00000484799 EZRP15311 586 aaKnown RBP3.1□□□□□ -1.91
SMC4-215ENST00000484799 GPX3P22352 226 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 TMOD1P28289 359 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 SPRP35270 261 aaPredicted RBP3.1□□□□□ -1.91
SMC4-215ENST00000484799 ABCE1P61221 599 aaKnown RBP3.1□□□□□ -1.91
SMC4-215ENST00000484799 NDPQ00604 133 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 HSF2Q03933 536 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 AGKQ53H12 422 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 ZNF506Q5JVG8 444 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 LRRC8BQ6P9F7 803 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 CCBE1Q6UXH8 406 aaPredicted RBP3.1□□□□□ -1.91
SMC4-215ENST00000484799 TMEM26Q6ZUK4 368 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 ASRGL1Q7L266 308 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 BNIPLQ7Z465 357 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 PPP1R42Q7Z4L9 355 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 RPAINQ86UA6 219 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 SLC22A16Q86VW1 577 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 MISPQ8IVT2 679 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 DND1Q8IYX4 353 aaKnown RBP3.1□□□□□ -1.91
SMC4-215ENST00000484799 GVQW1Q8N7I0 195 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 ZNF540Q8NDQ6 660 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 OR52B4Q8NGK2 314 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 RDH11Q8TC12 318 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 GIPC3Q8TF64 312 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 TMEM37Q8WXS4 190 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 PHYHIPQ92561 330 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 TMEM45BQ96B21 275 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 MRPL53Q96EL3 112 aaKnown RBP3.1□□□□□ -1.91
SMC4-215ENST00000484799 C16orf58Q96GQ5 468 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 RAB40CQ96S21 281 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 NDUFAF3Q9BU61 184 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 CCDC28BQ9BUN5 200 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 TPPP3Q9BW30 176 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 PINK1Q9BXM7 581 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 YTHDF1Q9BYJ9 559 aaKnown RBP3.1□□□□□ -1.91
SMC4-215ENST00000484799 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
SMC4-215ENST00000484799 NT5C3AQ9H0P0 336 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms