RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 SIMC1Q8NDZ2 872 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 PSMA8Q8TAA3 256 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 LRRC8CQ8TDW0 803 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 PAQR8Q8TEZ7 354 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 HOXB13Q92826 284 aaPredicted RBP14.66□□□□□ -0.06
UPF3A-208ENST00000484246 KAT2AQ92830 837 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 GFM2Q969S9 779 aaKnown RBP14.66□□□□□ -0.06
UPF3A-208ENST00000484246 COQ8BQ96D53 544 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 ELP4Q96EB1 424 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 HSPBAP1Q96EW2 488 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 LCORQ96JN0 433 aaPredicted RBP14.66□□□□□ -0.06
UPF3A-208ENST00000484246 SECISBP2Q96T21 854 aaKnown RBP14.66□□□□□ -0.06
UPF3A-208ENST00000484246 ITPAQ9BY32 194 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 NXF5Q9H1B4 397 aaKnown RBP14.66□□□□□ -0.06
UPF3A-208ENST00000484246 KLHL1Q9NR64 748 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 OLAHQ9NV23 265 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 INTS9Q9NV88 658 aaKnown RBP14.66□□□□□ -0.06
UPF3A-208ENST00000484246 ATAD3AQ9NVI7 634 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 SH3BP4Q9P0V3 963 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 BCAP29Q9UHQ4 241 aa14.66□□□□□ -0.06
UPF3A-208ENST00000484246 GPR55Q9Y2T6 319 aaPredicted RBP14.66□□□□□ -0.06
UPF3A-208ENST00000484246 ZNF195O14628 629 aa14.65□□□□□ -0.06
UPF3A-208ENST00000484246 ANKRD28O15084 1053 aa14.65□□□□□ -0.06
UPF3A-208ENST00000484246 MC3RP41968 323 aa14.65□□□□□ -0.06
UPF3A-208ENST00000484246 ST13P50502 369 aaKnown RBP14.65□□□□□ -0.06
UPF3A-208ENST00000484246 NR0B1P51843 470 aaKnown RBP14.65□□□□□ -0.06
UPF3A-208ENST00000484246 DIO3P55073 304 aa14.65□□□□□ -0.06
UPF3A-208ENST00000484246 NRG3P56975 720 aa14.65□□□□□ -0.06
UPF3A-208ENST00000484246 RPS6KA2Q15349 733 aa14.65□□□□□ -0.06
UPF3A-208ENST00000484246 MAPKAPK3Q16644 382 aa14.65□□□□□ -0.06
UPF3A-208ENST00000484246 ANKRD26P1Q6NSI1 321 aa14.65□□□□□ -0.06
UPF3A-208ENST00000484246 TMEM81Q6P7N7 255 aa14.65□□□□□ -0.06
UPF3A-208ENST00000484246 IL20RBQ6UXL0 311 aa14.65□□□□□ -0.06
UPF3A-208ENST00000484246 MAVSQ7Z434 540 aa14.65□□□□□ -0.06
UPF3A-208ENST00000484246 SPATA19Q7Z5L4 167 aa14.65□□□□□ -0.06
UPF3A-208ENST00000484246 ACTRT2Q8TDY3 377 aa14.65□□□□□ -0.06
UPF3A-208ENST00000484246 CKAP2Q8WWK9 683 aa14.65□□□□□ -0.06
UPF3A-208ENST00000484246 STON2Q8WXE9 905 aa14.65□□□□□ -0.06
UPF3A-208ENST00000484246 CIDECQ96AQ7 238 aaPredicted RBP14.65□□□□□ -0.06
UPF3A-208ENST00000484246 PRPF18Q99633 342 aaKnown RBP14.65□□□□□ -0.06
UPF3A-208ENST00000484246 BHLHE41Q9C0J9 482 aaPredicted RBP14.65□□□□□ -0.06
UPF3A-208ENST00000484246 TAS2R9Q9NYW1 312 aa14.65□□□□□ -0.06
UPF3A-208ENST00000484246 MARCOQ9UEW3 520 aaPredicted RBP14.65□□□□□ -0.06
UPF3A-208ENST00000484246 VPS4AQ9UN37 437 aa14.65□□□□□ -0.06
UPF3A-208ENST00000484246 ANKRD33BA6NCL7 494 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 TTC36A6NLP5 189 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 TCP11X1B4DZS4 312 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 KLRC4-KLRK1H3BQV0 150 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 UPK1AO00322 258 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 ATP8B1O43520 1251 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 CBX6O95503 412 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 CT45A8P0DMV1 189 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 CT45A9P0DMV2 189 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 ABCD3P28288 659 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 PMP22Q01453 160 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 CT45A2Q5DJT8 189 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 CPTPQ5TA50 214 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 TMEM107Q6UX40 140 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 ZNF551Q7Z340 670 aaPredicted RBP14.64□□□□□ -0.07
UPF3A-208ENST00000484246 SIAH3Q8IW03 269 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 FBXW8Q8N3Y1 598 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 TESCQ96BS2 214 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 NTNG2Q96CW9 530 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 PPP1R36Q96LQ0 422 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 MAGEB18Q96M61 343 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 FOLH1BQ9HBA9 442 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 NEUROD4Q9HD90 331 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 SACM1LQ9NTJ5 587 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 DDX18Q9NVP1 670 aaKnown RBP14.64□□□□□ -0.07
UPF3A-208ENST00000484246 AIG1Q9NVV5 245 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 CNIH4Q9P003 139 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 NPFFR2Q9Y5X5 522 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 CHCHD2Q9Y6H1 151 aaPredicted RBP14.64□□□□□ -0.07
UPF3A-208ENST00000484246 MAST4O15021 2626 aa14.64□□□□□ -0.07
UPF3A-208ENST00000484246 PEX1O43933 1283 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 TGDSO95455 350 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 ALDOCP09972 364 aaKnown RBP14.63□□□□□ -0.07
UPF3A-208ENST00000484246 CCL3P10147 92 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 LAMP1P11279 417 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 MEOX1P50221 254 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 HYAL4Q2M3T9 481 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 DPY19L1Q2PZI1 675 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 TBCELQ5QJ74 424 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 NPSR1Q6W5P4 371 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 TMEM64Q6YI46 380 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 BNC2Q6ZN30 1099 aaPredicted RBP14.63□□□□□ -0.07
UPF3A-208ENST00000484246 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.63□□□□□ -0.07
UPF3A-208ENST00000484246 SULF2Q8IWU5 870 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 SLC34A3Q8N130 599 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 KRTCAP2Q8N6L1 136 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 OR2M7Q8NG81 312 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 OR7A2PQ8NGA2 310 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 OR10G3Q8NGC4 313 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 OR8J2Q8NGG1 315 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 DYDC1Q8WWB3 177 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 OR5P2Q8WZ92 322 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 LMF2Q9BU23 707 aaKnown RBP14.63□□□□□ -0.07
UPF3A-208ENST00000484246 ANKRA2Q9H9E1 313 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 SLCO1B3Q9NPD5 702 aa14.63□□□□□ -0.07
UPF3A-208ENST00000484246 MED4Q9NPJ6 270 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms