RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 OR5L2Q8NGL0 311 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 OR8K3Q8NH51 312 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 ERP27Q96DN0 273 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 YIPF4Q9BSR8 244 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 TRIM4Q9C037 500 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 RMND5AQ9H871 391 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 FOLH1BQ9HBA9 442 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 C3orf14Q9HBI5 128 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 SERHLQ9NQF3 203 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 PLA2G3Q9NZ20 509 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 STMN3Q9NZ72 180 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 PRODH2Q9UF12 536 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 BTNL2Q9UIR0 455 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 LHX6Q9UPM6 363 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 ARL2BPQ9Y2Y0 163 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 PCDHGA9Q9Y5G4 932 aaKnown RBP16.52■□□□□ 0.24
CPNE1-224ENST00000483359 CAPN7Q9Y6W3 813 aa16.52■□□□□ 0.24
CPNE1-224ENST00000483359 CPAMD8Q8IZJ3 1885 aa16.52■□□□□ 0.23
CPNE1-224ENST00000483359 EMC8O43402 210 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 CCDC22O60826 627 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 BCAS2O75934 225 aaPredicted RBP16.51■□□□□ 0.23
CPNE1-224ENST00000483359 NR0B1P51843 470 aaKnown RBP16.51■□□□□ 0.23
CPNE1-224ENST00000483359 CASP9P55211 416 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 CORO7P57737 925 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 LY6DQ14210 128 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 PSMA8Q8TAA3 256 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 NUBPLQ8TB37 319 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 JADE3Q92613 823 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 ZNF354BQ96LW1 612 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 MS4A4EQ96PG1 132 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 SLC6A13Q9NSD5 602 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 CFL2Q9Y281 166 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 BSNQ9UPA5 3926 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 ZNF354AO60765 605 aaPredicted RBP16.51■□□□□ 0.23
CPNE1-224ENST00000483359 ANP32DO95626 131 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 C1QCP02747 245 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 MLF1P58340 268 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 RPS26P62854 115 aaKnown RBP16.51■□□□□ 0.23
CPNE1-224ENST00000483359 LASP1Q14847 261 aaKnown RBP16.51■□□□□ 0.23
CPNE1-224ENST00000483359 GTDC1Q4AE62 458 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 PAGE3Q5JUK9 113 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 ANGPTL8Q6UXH0 198 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 TMEM64Q6YI46 380 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 ZNF621Q6ZSS3 439 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 EXD3Q8N9H8 876 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 ADIPOR1Q96A54 375 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 VSTM2LQ96N03 204 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 SMAD5Q99717 465 aaKnown RBP16.51■□□□□ 0.23
CPNE1-224ENST00000483359 NXF5Q9H1B4 397 aaKnown RBP16.51■□□□□ 0.23
CPNE1-224ENST00000483359 EPS8L2Q9H6S3 715 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 SLC52A3Q9NQ40 469 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 CSAG2Q9Y5P2 127 aa16.51■□□□□ 0.23
CPNE1-224ENST00000483359 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.5■□□□□ 0.23
CPNE1-224ENST00000483359 ERVH48-1M5A8F1 160 aa16.5■□□□□ 0.23
CPNE1-224ENST00000483359 NDUFAB1O14561 156 aa16.5■□□□□ 0.23
CPNE1-224ENST00000483359 ANGPT2O15123 496 aa16.5■□□□□ 0.23
CPNE1-224ENST00000483359 ERN1O75460 977 aaKnown RBP16.5■□□□□ 0.23
CPNE1-224ENST00000483359 PSMG1O95456 288 aa16.5■□□□□ 0.23
CPNE1-224ENST00000483359 WDPCPO95876 746 aa16.5■□□□□ 0.23
CPNE1-224ENST00000483359 HMGN2P05204 90 aaKnown RBP16.5■□□□□ 0.23
CPNE1-224ENST00000483359 MFAP5Q13361 173 aa16.5■□□□□ 0.23
CPNE1-224ENST00000483359 ZNF468Q5VIY5 522 aaPredicted RBP16.5■□□□□ 0.23
CPNE1-224ENST00000483359 PRR22Q8IZ63 422 aa16.5■□□□□ 0.23
CPNE1-224ENST00000483359 C9orf43Q8TAL5 461 aaPredicted RBP16.5■□□□□ 0.23
CPNE1-224ENST00000483359 BCAS4Q8TDM0 211 aa16.5■□□□□ 0.23
CPNE1-224ENST00000483359 GIMAP5Q96F15 307 aa16.5■□□□□ 0.23
CPNE1-224ENST00000483359 C16orf58Q96GQ5 468 aa16.5■□□□□ 0.23
CPNE1-224ENST00000483359 ITCHQ96J02 903 aa16.5■□□□□ 0.23
CPNE1-224ENST00000483359 LMF1Q96S06 567 aa16.5■□□□□ 0.23
CPNE1-224ENST00000483359 RASL10BQ96S79 203 aa16.5■□□□□ 0.23
CPNE1-224ENST00000483359 SLC35A5Q9BS91 424 aa16.5■□□□□ 0.23
CPNE1-224ENST00000483359 LOC100653049A0A140TA62 436 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 A0A1W2PP18 115 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 KRT34O76011 436 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 SNRPB2P08579 225 aaKnown RBP16.49■□□□□ 0.23
CPNE1-224ENST00000483359 CD97P48960 835 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 PCSK4Q6UW60 755 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 NPSR1Q6W5P4 371 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 SNX32Q86XE0 403 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 POU5F2Q8N7G0 328 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 OR56A1Q8NGH5 318 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 PNPT1Q8TCS8 783 aaKnown RBP16.49■□□□□ 0.23
CPNE1-224ENST00000483359 SLC9A6Q92581 669 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 GTF2H4Q92759 462 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 MRGBPQ9NV56 204 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 TMEM45AQ9NWC5 275 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 SLAMF8Q9P0V8 285 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 ABI3Q9P2A4 366 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 VPS4AQ9UN37 437 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 NDUFAF1Q9Y375 327 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 SPENQ96T58 3664 aaKnown RBP16.49■□□□□ 0.23
CPNE1-224ENST00000483359 UQCRC2P22695 453 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 CHI3L1P36222 383 aaPredicted RBP16.49■□□□□ 0.23
CPNE1-224ENST00000483359 SOX3P41225 446 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 SSR4P51571 173 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 ARG2P78540 354 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 PSG6Q00889 435 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 OC90Q02509 493 aaPredicted RBP16.49■□□□□ 0.23
CPNE1-224ENST00000483359 LRRC74AQ0VAA2 488 aa16.49■□□□□ 0.23
CPNE1-224ENST00000483359 TLR1Q15399 786 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms