RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 ECHDC3Q96DC8 303 aa6.15□□□□□ -1.42
CLK1-212ENST00000482590 ERGIC2Q96RQ1 377 aa6.15□□□□□ -1.42
CLK1-212ENST00000482590 SECISBP2Q96T21 854 aaKnown RBP6.15□□□□□ -1.42
CLK1-212ENST00000482590 TUBA1CQ9BQE3 449 aa6.15□□□□□ -1.42
CLK1-212ENST00000482590 SLC29A3Q9BZD2 475 aa6.15□□□□□ -1.42
CLK1-212ENST00000482590 GPR61Q9BZJ8 451 aa6.15□□□□□ -1.42
CLK1-212ENST00000482590 TRIM4Q9C037 500 aa6.15□□□□□ -1.42
CLK1-212ENST00000482590 SLC39A8Q9C0K1 460 aa6.15□□□□□ -1.42
CLK1-212ENST00000482590 RNPEPL1Q9HAU8 725 aa6.15□□□□□ -1.42
CLK1-212ENST00000482590 PPANQ9NQ55 473 aaKnown RBP6.15□□□□□ -1.42
CLK1-212ENST00000482590 PARVAQ9NVD7 372 aa6.15□□□□□ -1.42
CLK1-212ENST00000482590 MRPS7Q9Y2R9 242 aaKnown RBP6.15□□□□□ -1.42
CLK1-212ENST00000482590 C15orf38-AP3S2A0A0A6YYH1 394 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 LOC100653049A0A140TA62 436 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 SERTM2A0A1B0GWG4 89 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 CDHR4A6H8M9 788 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 IFNL4K9M1U5 179 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 PSMD11O00231 422 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 RHBDL1O75783 438 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 KRT34O76011 436 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 HEXAP06865 529 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 HOXC4P09017 264 aaPredicted RBP6.14□□□□□ -1.43
CLK1-212ENST00000482590 HOXB5P09067 269 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 CCNB1P14635 433 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 GNAZP19086 355 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 PTPN6P29350 595 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 SERPINB6P35237 376 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 ETV5P41161 510 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 ACTR1BP42025 376 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 DGKQP52824 942 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 MAZP56270 477 aaKnown RBP6.14□□□□□ -1.43
CLK1-212ENST00000482590 CDK3Q00526 305 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 OGDHQ02218 1023 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 ZFP36L1Q07352 338 aaKnown RBP6.14□□□□□ -1.43
CLK1-212ENST00000482590 SNTB2Q13425 540 aaKnown RBP6.14□□□□□ -1.43
CLK1-212ENST00000482590 FGFBP1Q14512 234 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 IL13RA2Q14627 380 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 ARHGAP19Q14CB8 494 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 C16orf72Q14CZ0 275 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 RNPS1Q15287 305 aaKnown RBP6.14□□□□□ -1.43
CLK1-212ENST00000482590 CNGA3Q16281 694 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 STX1AQ16623 288 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 CLPPQ16740 277 aaPredicted RBP6.14□□□□□ -1.43
CLK1-212ENST00000482590 CA9Q16790 459 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 AP5B1Q2VPB7 878 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 CXorf66Q5JRM2 361 aaPredicted RBP6.14□□□□□ -1.43
CLK1-212ENST00000482590 RNASEH2BQ5TBB1 312 aaKnown RBP6.14□□□□□ -1.43
CLK1-212ENST00000482590 KCTD16Q68DU8 428 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 PNCKQ6P2M8 343 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 DOK6Q6PKX4 331 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 WDR88Q6ZMY6 472 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 NUDT13Q86X67 352 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 ATPAF2Q8N5M1 289 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 METTL25Q8N6Q8 603 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 NPWQ8N729 165 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 ZNF321PQ8N8H1 164 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 C11orf44Q8N8P7 122 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 L3MBTL4Q8NA19 623 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 CCL4L1Q8NHW4 92 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 TBC1D15Q8TC07 691 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 TMEM171Q8WVE6 324 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 ROBO4Q8WZ75 1007 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 INPP5DQ92835 1189 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 DTD2Q96FN9 168 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 SLC41A2Q96JW4 573 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 ATP6V1G3Q96LB4 118 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 ZNF599Q96NL3 588 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 PSKH2Q96QS6 385 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 KATNB1Q9BVA0 655 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 PTDSS2Q9BVG9 487 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 RDH14Q9HBH5 336 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 TAAR2Q9P1P5 351 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 STEAP1Q9UHE8 339 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 NDRG4Q9ULP0 352 aaKnown RBP6.14□□□□□ -1.43
CLK1-212ENST00000482590 FLNCQ14315 2725 aa6.14□□□□□ -1.43
CLK1-212ENST00000482590 ACOD1A6NK06 481 aa6.13□□□□□ -1.43
CLK1-212ENST00000482590 C3orf70A6NLC5 250 aaPredicted RBP6.13□□□□□ -1.43
CLK1-212ENST00000482590 C17orf100A8MU93 164 aa6.13□□□□□ -1.43
CLK1-212ENST00000482590 TRAFD1O14545 582 aaPredicted RBP6.13□□□□□ -1.43
CLK1-212ENST00000482590 DUX1O43812 170 aa6.13□□□□□ -1.43
CLK1-212ENST00000482590 SELENOFO60613 162 aa6.13□□□□□ -1.43
CLK1-212ENST00000482590 NME6O75414 186 aaPredicted RBP6.13□□□□□ -1.43
CLK1-212ENST00000482590 LRCH4O75427 683 aa6.13□□□□□ -1.43
CLK1-212ENST00000482590 CTAG2O75638 210 aa6.13□□□□□ -1.43
CLK1-212ENST00000482590 ZFPL1O95159 310 aa6.13□□□□□ -1.43
CLK1-212ENST00000482590 LINGO3P0C6S8 592 aa6.13□□□□□ -1.43
CLK1-212ENST00000482590 GM2AP17900 193 aa6.13□□□□□ -1.43
CLK1-212ENST00000482590 NR1D1P20393 614 aa6.13□□□□□ -1.43
CLK1-212ENST00000482590 PRPH2P23942 346 aa6.13□□□□□ -1.43
CLK1-212ENST00000482590 AK4P27144 223 aaPredicted RBP6.13□□□□□ -1.43
CLK1-212ENST00000482590 POU1F1P28069 291 aa6.13□□□□□ -1.43
CLK1-212ENST00000482590 MIPP30301 263 aa6.13□□□□□ -1.43
CLK1-212ENST00000482590 CSTF2P33240 577 aaKnown RBP eCLIP6.13□□□□□ -1.43
CLK1-212ENST00000482590 TRIM23P36406 574 aa6.13□□□□□ -1.43
CLK1-212ENST00000482590 GPR1P46091 355 aa6.13□□□□□ -1.43
CLK1-212ENST00000482590 CSRP3P50461 194 aa6.13□□□□□ -1.43
CLK1-212ENST00000482590 ARSEP51690 589 aa6.13□□□□□ -1.43
CLK1-212ENST00000482590 CARD18P57730 90 aa6.13□□□□□ -1.43
CLK1-212ENST00000482590 OR1D5P58170 312 aa6.13□□□□□ -1.43
CLK1-212ENST00000482590 MAXP61244 160 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms