RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 PLA2G10O15496 165 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 NUPL2O15504 423 aaKnown RBP12.02□□□□□ -0.49
VPS52-218ENST00000482399 ZNF780AO75290 641 aaPredicted RBP12.02□□□□□ -0.49
VPS52-218ENST00000482399 GABRB1P18505 474 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 NTSP30990 170 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 AHRP35869 848 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 ETV6P41212 452 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 SLC8B1Q6J4K2 584 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 NXPE4Q6UWF7 544 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 ZNF783Q6ZMS7 281 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 SPRYD4Q8WW59 207 aaPredicted RBP12.02□□□□□ -0.49
VPS52-218ENST00000482399 ALG14Q96F25 216 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 ZSCAN5AQ9BUG6 496 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 PLA2G12AQ9BZM1 189 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 RNF186Q9NXI6 227 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 PPIEQ9UNP9 301 aaKnown RBP12.02□□□□□ -0.49
VPS52-218ENST00000482399 WDR90Q96KV7 1748 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 TET1Q8NFU7 2136 aa12.02□□□□□ -0.49
VPS52-218ENST00000482399 TRBV23OR9-2A0A075B6M9 112 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 PCDH8O95206 1070 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 SEMG1P04279 462 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 HLA-DPB1P04440 258 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 PEPDP12955 493 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 HSD3B1P14060 373 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 HSD3B2P26439 372 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 ILKQ13418 452 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 ADAM15Q13444 863 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 ZMYND11Q15326 602 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 ZNF311Q5JNZ3 666 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 MEDAGQ5VYS4 303 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 CST9Q5W186 159 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 ZNF433Q8N7K0 673 aaPredicted RBP12.01□□□□□ -0.49
VPS52-218ENST00000482399 GPR32P1Q8NGA4 272 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 ZFPM2Q8WW38 1151 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 BRF2Q9HAW0 419 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 KLHL28Q9NXS3 571 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 TAS2R7Q9NYW3 318 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 TNFRSF10DQ9UBN6 386 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 TDRD15B5MCY1 1934 aaKnown RBP12.01□□□□□ -0.49
VPS52-218ENST00000482399 TNS1Q9HBL0 1735 aaKnown RBP12.01□□□□□ -0.49
VPS52-218ENST00000482399 SLC16A5O15375 505 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 IL1AP01583 271 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 IGHA2P01877 340 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 CLTBP09497 229 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 PRG2P13727 222 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 PPP3R1P63098 170 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 TAP2Q03519 686 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 PCDH1Q08174 1060 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 PIP5KL1Q5T9C9 394 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 CDC73Q6P1J9 531 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 GAREM2Q75VX8 874 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 VN1R5Q7Z5H4 357 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 SYT9Q86SS6 491 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 PIAS4Q8N2W9 510 aaPredicted RBP12.01□□□□□ -0.49
VPS52-218ENST00000482399 FAM109AQ8N4B1 249 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 OR4D11Q8NGI4 311 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 TFGQ92734 400 aaPredicted RBP12.01□□□□□ -0.49
VPS52-218ENST00000482399 TIFAQ96CG3 184 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 ARPC5LQ9BPX5 153 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 AIF1LQ9BQI0 150 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 ZCCHC2Q9C0B9 1178 aaKnown RBP12.01□□□□□ -0.49
VPS52-218ENST00000482399 ELAC1Q9H777 363 aaKnown RBP12.01□□□□□ -0.49
VPS52-218ENST00000482399 THSD1Q9NS62 852 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 RBFOX1Q9NWB1 397 aaKnown RBP12.01□□□□□ -0.49
VPS52-218ENST00000482399 J3QLW9 94 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 PGRMC2O15173 223 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 PI15O43692 258 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 SCO2O43819 266 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 OR5F1O95221 314 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 SLC2A10O95528 541 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 C1orf105O95561 183 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 ZNF19P17023 458 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 PRKACBP22694 351 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 KELP23276 732 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 WASP42768 502 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 RPS5P46782 204 aaKnown RBP12.01□□□□□ -0.49
VPS52-218ENST00000482399 MVDP53602 400 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 PRSS53Q2L4Q9 553 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 TMEM107Q6UX40 140 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 SLC36A4Q6YBV0 504 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 GDPGP1Q6ZNW5 385 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 UBE2E3Q969T4 207 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 ZNF558Q96NG5 402 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 NXF2Q9GZY0 626 aaKnown RBP12.01□□□□□ -0.49
VPS52-218ENST00000482399 DDX31Q9H8H2 851 aaKnown RBP12.01□□□□□ -0.49
VPS52-218ENST00000482399 SLAMF7Q9NQ25 335 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 NDUFB11Q9NX14 153 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 NPAP1Q9NZP6 1156 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 SLC23A1Q9UHI7 598 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 ENTPD4Q9Y227 616 aa12.01□□□□□ -0.49
VPS52-218ENST00000482399 A0A1W2PQ45 241 aaPredicted RBP12□□□□□ -0.49
VPS52-218ENST00000482399 A0A1W2PQY0 241 aa12□□□□□ -0.49
VPS52-218ENST00000482399 CIB4A0PJX0 185 aa12□□□□□ -0.49
VPS52-218ENST00000482399 DVL2O14641 736 aa12□□□□□ -0.49
VPS52-218ENST00000482399 AKAP8O43823 692 aaKnown RBP12□□□□□ -0.49
VPS52-218ENST00000482399 C8AP07357 584 aa12□□□□□ -0.49
VPS52-218ENST00000482399 SAGP10523 405 aaPredicted RBP12□□□□□ -0.49
VPS52-218ENST00000482399 GZMKP49863 264 aa12□□□□□ -0.49
VPS52-218ENST00000482399 PNLIPRP1P54315 467 aa12□□□□□ -0.49
VPS52-218ENST00000482399 ASAH1Q13510 395 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms