RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 FIS1Q9Y3D6 152 aa14.37□□□□□ -0.11
HDLBP-238ENST00000479894 H7C1Q1 480 aa14.36□□□□□ -0.11
HDLBP-238ENST00000479894 CLDN4O14493 209 aa14.36□□□□□ -0.11
HDLBP-238ENST00000479894 ITM2AO43736 263 aa14.36□□□□□ -0.11
HDLBP-238ENST00000479894 LYPLA1O75608 230 aaPredicted RBP14.36□□□□□ -0.11
HDLBP-238ENST00000479894 SCELO95171 688 aa14.36□□□□□ -0.11
HDLBP-238ENST00000479894 RNH1P13489 461 aaKnown RBP14.36□□□□□ -0.11
HDLBP-238ENST00000479894 IL1RNP18510 177 aa14.36□□□□□ -0.11
HDLBP-238ENST00000479894 ASCL1P50553 236 aa14.36□□□□□ -0.11
HDLBP-238ENST00000479894 NR0B1P51843 470 aaKnown RBP14.36□□□□□ -0.11
HDLBP-238ENST00000479894 FOXA1P55317 472 aa14.36□□□□□ -0.11
HDLBP-238ENST00000479894 GPR85P60893 370 aa14.36□□□□□ -0.11
HDLBP-238ENST00000479894 PPIAP62937 165 aaKnown RBP14.36□□□□□ -0.11
HDLBP-238ENST00000479894 TRA2BP62995 288 aaKnown RBP14.36□□□□□ -0.11
HDLBP-238ENST00000479894 ATP6AP1LQ52LC2 224 aa14.36□□□□□ -0.11
HDLBP-238ENST00000479894 C1orf185Q5T7R7 199 aa14.36□□□□□ -0.11
HDLBP-238ENST00000479894 PRSS57Q6UWY2 283 aa14.36□□□□□ -0.11
HDLBP-238ENST00000479894 SLC22A16Q86VW1 577 aa14.36□□□□□ -0.11
HDLBP-238ENST00000479894 SHISA5Q8N114 240 aa14.36□□□□□ -0.11
HDLBP-238ENST00000479894 CIARTQ8N365 385 aaPredicted RBP14.36□□□□□ -0.11
HDLBP-238ENST00000479894 ZNF781Q8N8C0 355 aa14.36□□□□□ -0.11
HDLBP-238ENST00000479894 AGR3Q8TD06 166 aa14.36□□□□□ -0.11
HDLBP-238ENST00000479894 TSLPQ969D9 159 aa14.36□□□□□ -0.11
HDLBP-238ENST00000479894 KCNA7Q96RP8 456 aa14.36□□□□□ -0.11
HDLBP-238ENST00000479894 SORT1Q99523 831 aa14.36□□□□□ -0.11
HDLBP-238ENST00000479894 MACROD1Q9BQ69 325 aa14.36□□□□□ -0.11
HDLBP-238ENST00000479894 LANCL2Q9NS86 450 aa14.36□□□□□ -0.11
HDLBP-238ENST00000479894 C1orf109Q9NX04 203 aa14.36□□□□□ -0.11
HDLBP-238ENST00000479894 SIRT5Q9NXA8 310 aa14.36□□□□□ -0.11
HDLBP-238ENST00000479894 FREM3P0C091 2139 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 SAGE2PA6NJ88 616 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 HSPB2A8KAH6 182 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 SGK494L7N484 410 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 AQP7O14520 342 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 SEC22BO75396 215 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 GABRA1P14867 456 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 TACR1P25103 407 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 ATP5A1P25705 553 aaKnown RBP14.35□□□□□ -0.11
HDLBP-238ENST00000479894 SERPINB3P29508 390 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 BUD31P41223 144 aaPredicted RBP14.35□□□□□ -0.11
HDLBP-238ENST00000479894 BIKQ13323 160 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 HSPB2Q16082 182 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 UGT3A2Q3SY77 523 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 Q5PR19 223 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 CCNYL2Q5T2Q4 361 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 GALNT18Q6P9A2 607 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 MDGA2Q7Z553 956 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 P3H2Q8IVL5 708 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 TMEM156Q8N614 296 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 ACOT4Q8N9L9 421 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 PIP5K1AQ99755 562 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 FAIM2Q9BWQ8 316 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 DEFB126Q9BYW3 111 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 ACPTQ9BZG2 426 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 KLHL31Q9H511 634 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 LRTM1Q9HBL6 345 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 PRDM9Q9NQV7 894 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 PRDM7Q9NQW5 492 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 FARSBQ9NSD9 589 aaKnown RBP14.35□□□□□ -0.11
HDLBP-238ENST00000479894 MAPRE3Q9UPY8 281 aa14.35□□□□□ -0.11
HDLBP-238ENST00000479894 TUBAL3A6NHL2 446 aa14.34□□□□□ -0.11
HDLBP-238ENST00000479894 RNF212BA8MTL3 300 aa14.34□□□□□ -0.11
HDLBP-238ENST00000479894 PLPP1O14494 284 aa14.34□□□□□ -0.11
HDLBP-238ENST00000479894 PIP5K1BO14986 540 aa14.34□□□□□ -0.11
HDLBP-238ENST00000479894 SUSD5O60279 629 aa14.34□□□□□ -0.11
HDLBP-238ENST00000479894 CDC123O75794 336 aaPredicted RBP14.34□□□□□ -0.11
HDLBP-238ENST00000479894 STATHP02808 62 aa14.34□□□□□ -0.11
HDLBP-238ENST00000479894 VIMP08670 466 aaKnown RBP14.34□□□□□ -0.11
HDLBP-238ENST00000479894 LINC00032P0C843 101 aa14.34□□□□□ -0.11
HDLBP-238ENST00000479894 TROVE2P10155 538 aaKnown RBP eCLIP14.34□□□□□ -0.11
HDLBP-238ENST00000479894 PPP2R1BP30154 601 aa14.34□□□□□ -0.11
HDLBP-238ENST00000479894 MAPK12P53778 367 aa14.34□□□□□ -0.11
HDLBP-238ENST00000479894 PLGLB1Q02325 96 aa14.34□□□□□ -0.11
HDLBP-238ENST00000479894 SLAMF1Q13291 335 aa14.34□□□□□ -0.11
HDLBP-238ENST00000479894 NDUFAF5Q5TEU4 345 aa14.34□□□□□ -0.11
HDLBP-238ENST00000479894 ADNP2Q6IQ32 1131 aa14.34□□□□□ -0.11
HDLBP-238ENST00000479894 TRILQ7L0X0 811 aa14.34□□□□□ -0.11
HDLBP-238ENST00000479894 GPALPP1Q8IXQ4 340 aa14.34□□□□□ -0.11
HDLBP-238ENST00000479894 RELL2Q8NC24 303 aaPredicted RBP14.34□□□□□ -0.11
HDLBP-238ENST00000479894 TBC1D20Q96BZ9 403 aa14.34□□□□□ -0.11
HDLBP-238ENST00000479894 TUBGCP3Q96CW5 907 aa14.34□□□□□ -0.11
HDLBP-238ENST00000479894 PEX11GQ96HA9 241 aa14.34□□□□□ -0.11
HDLBP-238ENST00000479894 SECISBP2Q96T21 854 aaKnown RBP14.34□□□□□ -0.11
HDLBP-238ENST00000479894 MCM8Q9UJA3 840 aa14.34□□□□□ -0.11
HDLBP-238ENST00000479894 PSME2Q9UL46 239 aa14.34□□□□□ -0.11
HDLBP-238ENST00000479894 EIF3LQ9Y262 564 aaKnown RBP14.34□□□□□ -0.11
HDLBP-238ENST00000479894 GNG14A0A1W2PPG7 69 aa14.33□□□□□ -0.12
HDLBP-238ENST00000479894 CLCA1A8K7I4 914 aa14.33□□□□□ -0.12
HDLBP-238ENST00000479894 DVL2O14641 736 aa14.33□□□□□ -0.12
HDLBP-238ENST00000479894 CHST10O43529 356 aa14.33□□□□□ -0.12
HDLBP-238ENST00000479894 RDH16O75452 317 aa14.33□□□□□ -0.12
HDLBP-238ENST00000479894 CRLF1O75462 422 aa14.33□□□□□ -0.12
HDLBP-238ENST00000479894 TBX6O95947 436 aaPredicted RBP14.33□□□□□ -0.12
HDLBP-238ENST00000479894 ARRB2P32121 409 aa14.33□□□□□ -0.12
HDLBP-238ENST00000479894 BSGP35613 385 aa14.33□□□□□ -0.12
HDLBP-238ENST00000479894 HTR6P50406 440 aa14.33□□□□□ -0.12
HDLBP-238ENST00000479894 IRX1P78414 480 aaPredicted RBP14.33□□□□□ -0.12
HDLBP-238ENST00000479894 HMGCS1Q01581 520 aa14.33□□□□□ -0.12
HDLBP-238ENST00000479894 PDCD2Q16342 344 aaPredicted RBP14.33□□□□□ -0.12
HDLBP-238ENST00000479894 TCHHL1Q5QJ38 904 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms