RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 C9orf43Q8TAL5 461 aaPredicted RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 FBXO30Q8TB52 745 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 TAS1R2Q8TE23 839 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 ZFP90Q8TF47 636 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 FAR1Q8WVX9 515 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 RAB40AQ8WXH6 277 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 RBPMSQ93062 196 aaKnown RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 SLC25A36Q96CQ1 311 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 LGALS12Q96DT0 336 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 ZC3HAV1LQ96H79 300 aaKnown RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 ST6GAL2Q96JF0 529 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 MBOAT7Q96N66 472 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 ERMAPQ96PL5 475 aaPredicted RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 RBM4BQ9BQ04 359 aaKnown RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 LBHD1Q9BQE6 289 aaPredicted RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 SLC30A2Q9BRI3 323 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 RBM4Q9BWF3 364 aaKnown RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 PHF7Q9BWX1 381 aaPredicted RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 HEMGNQ9BXL5 484 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 FTHL17Q9BXU8 183 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 UGT2B28Q9BY64 529 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 UCK2Q9BZX2 261 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 GPR88Q9GZN0 384 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 CCDC90BQ9GZT6 254 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 NXF2Q9GZY0 626 aaKnown RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 LHPPQ9H008 270 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 KLHL31Q9H511 634 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 EPHX3Q9H6B9 360 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 OPA3Q9H6K4 179 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 TASP1Q9H6P5 420 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 ZNF334Q9HCZ1 680 aaPredicted RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 GKN1Q9NS71 199 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 SETD4Q9NVD3 440 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 DUS2Q9NX74 493 aaKnown RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 DPP3Q9NY33 737 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 TMEM181Q9P2C4 612 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 ABCD2Q9UBJ2 740 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 SEC14L4Q9UDX3 406 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 CD300AQ9UGN4 299 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 MLXQ9UH92 298 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 ZNF639Q9UID6 485 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 OSGIN1Q9UJX0 560 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 CLEC4AQ9UMR7 237 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 MGAT4BQ9UQ53 548 aa3.81□□□□□ -1.8
CMSS1-204ENST00000479555 MTF2Q9Y483 593 aaPredicted RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 MAGED1Q9Y5V3 778 aaPredicted RBP3.81□□□□□ -1.8
CMSS1-204ENST00000479555 CHD4Q14839 1912 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 TCRBV9S1A1TA0A576 114 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 C17orf102A2RUQ5 167 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 OR6C70A6NIJ9 312 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 LRRC72A6NJI9 287 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 MPTX1A8MV57 137 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 EFCAB9A8MZ26 197 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 TEX22C9J3V5 150 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 C19orf81C9J6K1 198 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 E5RI56 91 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 CDC7O00311 574 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 SULT1C2O00338 296 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 NTN3O00634 580 aaPredicted RBP3.8□□□□□ -1.8
CMSS1-204ENST00000479555 PER2O15055 1255 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 CFLARO15519 480 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 ZBTB14O43829 449 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 HCN1O60741 890 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 NIPSNAP2O75323 286 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 VPS26AO75436 327 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 STX11O75558 287 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 KCNK2O95069 426 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 CELF2O95319 508 aaKnown RBP3.8□□□□□ -1.8
CMSS1-204ENST00000479555 DHFRP00374 187 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 IFNA2P01563 188 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 TPOP07202 933 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 PROS1P07225 676 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 HSMCR30P0CW71 290 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 THRBP10828 461 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 RALAP11233 206 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 MLNP12872 115 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 ICAM2P13598 275 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 NCF1P14598 390 aaPredicted RBP3.8□□□□□ -1.8
CMSS1-204ENST00000479555 SLC2A4P14672 509 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 HPGDP15428 266 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 CHRNB2P17787 502 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 YWHAQP27348 245 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 CDH5P33151 784 aaPredicted RBP3.8□□□□□ -1.8
CMSS1-204ENST00000479555 SPAM1P38567 509 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 MTHFRP42898 656 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 ARCN1P48444 511 aaKnown RBP3.8□□□□□ -1.8
CMSS1-204ENST00000479555 BLKP51451 505 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 NKX2-5P52952 324 aaPredicted RBP3.8□□□□□ -1.8
CMSS1-204ENST00000479555 NAPAP54920 295 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 CASP6P55212 293 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 GPX6P59796 221 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 SNAP25P60880 206 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 AP1S1P61966 158 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 TIMM10P62072 90 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 UBE2IP63279 158 aaKnown RBP3.8□□□□□ -1.8
CMSS1-204ENST00000479555 ADARB1P78563 741 aaKnown RBP3.8□□□□□ -1.8
CMSS1-204ENST00000479555 GABPAQ06546 454 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 CD300CQ08708 224 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 GRIK2Q13002 908 aa3.8□□□□□ -1.8
CMSS1-204ENST00000479555 TFDP2Q14188 446 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms