RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 LOC285556D6RIA3 1793 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 MYBPHLA2RUH7 354 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 GREM1O60565 184 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 HPP00738 406 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 UGT2B7P16662 529 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 CALCRP30988 508 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 XKP51811 444 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 TNFRSF17Q02223 184 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 TSC22D1Q15714 1073 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 SYT14P1Q58G82 188 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 COX20Q5RI15 118 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 PCED1BQ96HM7 432 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 TINF2Q9BSI4 451 aa20.09■□□□□ 0.81
SDF4-206ENST00000478938 ADAT1Q9BUB4 502 aaKnown RBP20.09■□□□□ 0.81
SDF4-206ENST00000478938 RFXAPO00287 272 aa20.08■□□□□ 0.81
SDF4-206ENST00000478938 HBP1O60381 514 aa20.08■□□□□ 0.81
SDF4-206ENST00000478938 SOX30O94993 753 aa20.08■□□□□ 0.81
SDF4-206ENST00000478938 RECKO95980 971 aa20.08■□□□□ 0.81
SDF4-206ENST00000478938 EBLN1P0CF75 366 aa20.08■□□□□ 0.81
SDF4-206ENST00000478938 ETFAP13804 333 aa20.08■□□□□ 0.81
SDF4-206ENST00000478938 GABRA1P14867 456 aa20.08■□□□□ 0.81
SDF4-206ENST00000478938 S100A11P31949 105 aa20.08■□□□□ 0.81
SDF4-206ENST00000478938 CRATP43155 626 aa20.08■□□□□ 0.81
SDF4-206ENST00000478938 MSANTD1Q6ZTZ1 278 aa20.08■□□□□ 0.81
SDF4-206ENST00000478938 LRRC28Q86X40 367 aaPredicted RBP20.08■□□□□ 0.81
SDF4-206ENST00000478938 CHCHD4Q8N4Q1 142 aa20.08■□□□□ 0.81
SDF4-206ENST00000478938 ELP4Q96EB1 424 aa20.08■□□□□ 0.81
SDF4-206ENST00000478938 PTDSS2Q9BVG9 487 aa20.08■□□□□ 0.81
SDF4-206ENST00000478938 SPHK1Q9NYA1 384 aa20.08■□□□□ 0.81
SDF4-206ENST00000478938 MYEF2Q9P2K5 600 aaKnown RBP20.08■□□□□ 0.81
SDF4-206ENST00000478938 FKBPLQ9UIM3 349 aa20.08■□□□□ 0.81
SDF4-206ENST00000478938 CLEC4AQ9UMR7 237 aa20.08■□□□□ 0.81
SDF4-206ENST00000478938 A0A0U1RQF3 1178 aa20.08■□□□□ 0.8
SDF4-206ENST00000478938 HHLA1C9JL84 531 aa20.08■□□□□ 0.8
SDF4-206ENST00000478938 OR12D1P0DN82 309 aa20.08■□□□□ 0.8
SDF4-206ENST00000478938 MST1P26927 711 aa20.08■□□□□ 0.8
SDF4-206ENST00000478938 SSTP61278 116 aa20.08■□□□□ 0.8
SDF4-206ENST00000478938 DGCR2P98153 550 aa20.08■□□□□ 0.8
SDF4-206ENST00000478938 E2F1Q01094 437 aa20.08■□□□□ 0.8
SDF4-206ENST00000478938 B3GNTL1Q67FW5 361 aaPredicted RBP20.08■□□□□ 0.8
SDF4-206ENST00000478938 TMUB2Q71RG4 321 aa20.08■□□□□ 0.8
SDF4-206ENST00000478938 SYT12Q8IV01 421 aa20.08■□□□□ 0.8
SDF4-206ENST00000478938 MICALL2Q8IY33 904 aa20.08■□□□□ 0.8
SDF4-206ENST00000478938 ADAMTS19Q8TE59 1207 aa20.08■□□□□ 0.8
SDF4-206ENST00000478938 ARL5BQ96KC2 179 aa20.08■□□□□ 0.8
SDF4-206ENST00000478938 LRR1Q96L50 414 aa20.08■□□□□ 0.8
SDF4-206ENST00000478938 PKP4Q99569 1192 aa20.08■□□□□ 0.8
SDF4-206ENST00000478938 ARL6Q9H0F7 186 aa20.08■□□□□ 0.8
SDF4-206ENST00000478938 C20orf85Q9H1P6 137 aa20.08■□□□□ 0.8
SDF4-206ENST00000478938 BPIFA1Q9NP55 256 aa20.08■□□□□ 0.8
SDF4-206ENST00000478938 ZSCAN32Q9NX65 697 aa20.08■□□□□ 0.8
SDF4-206ENST00000478938 FLRT1Q9NZU1 646 aa20.08■□□□□ 0.8
SDF4-206ENST00000478938 MIOXQ9UGB7 285 aa20.08■□□□□ 0.8
SDF4-206ENST00000478938 IRAK3Q9Y616 596 aa20.08■□□□□ 0.8
SDF4-206ENST00000478938 HS3ST4Q9Y661 456 aa20.08■□□□□ 0.8
SDF4-206ENST00000478938 IRAK2O43187 625 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 IGF2P01344 180 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 SMIM6P0DI80 62 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 CBR1P16152 277 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 RBMS1P29558 406 aaKnown RBP20.07■□□□□ 0.8
SDF4-206ENST00000478938 HMGA2P52926 109 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 OAZ1P54368 228 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 MAP4K2Q12851 820 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 MBTPS1Q14703 1052 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 SF1Q15637 639 aaKnown RBP20.07■□□□□ 0.8
SDF4-206ENST00000478938 UAP1L1Q3KQV9 507 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 LDLRAD3Q86YD5 345 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 NFKBIDQ8NI38 313 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 KLRG1Q96E93 195 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 CACNG4Q9UBN1 327 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 GPN3Q9UHW5 284 aaPredicted RBP20.07■□□□□ 0.8
SDF4-206ENST00000478938 LHX6Q9UPM6 363 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 MOXD2PA6NHM9 499 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 MID1O15344 667 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 WNT1P04628 370 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 CELP19835 753 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 LILRA4P59901 499 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 WDR5P61964 334 aaKnown RBP20.07■□□□□ 0.8
SDF4-206ENST00000478938 LGALS3BPQ08380 585 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 SEC23BQ15437 767 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 OCLNQ16625 522 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 XKR6Q5GH73 641 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 GCNT6Q5T4J0 391 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 GLT6D1Q7Z4J2 308 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 OAFQ86UD1 273 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 L3MBTL4Q8NA19 623 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 OR5M9Q8NGP3 310 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 OR56B4Q8NH76 319 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 YIPF4Q9BSR8 244 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 NDOR1Q9UHB4 597 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 NINQ8N4C6 2090 aa20.07■□□□□ 0.8
SDF4-206ENST00000478938 EFCAB7A8K855 629 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 FZD7O75084 574 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 POP7O75817 140 aaKnown RBP20.06■□□□□ 0.8
SDF4-206ENST00000478938 EPB42P16452 691 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 MC4RP32245 332 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 RFX3P48380 749 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 HMGCS2P54868 508 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 ZNF124Q15973 351 aa20.06■□□□□ 0.8
SDF4-206ENST00000478938 ATP13A5Q4VNC0 1218 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms