RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 ALPPL2P10696 532 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 PCP11498 1178 aaKnown RBP3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 AREGP15514 252 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 FCARP24071 287 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 GPR183P32249 361 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 OPRL1P41146 370 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 CNN1P51911 297 aaKnown RBP3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 HMGCS2P54868 508 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 DSCR10P59022 87 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 BPIFB3P59826 476 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 SPP2Q13103 211 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 TMEM187Q14656 261 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 MTF1Q14872 753 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 C12orf60Q5U649 245 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 LYPLAL1Q5VWZ2 237 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 NEK5Q6P3R8 708 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 C1orf186Q6ZWK4 172 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 MIER3Q7Z3K6 550 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 C17orf64Q86WR6 236 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 OR5M9Q8NGP3 310 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 OR4A16Q8NH70 328 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 UBTD2Q8WUN7 234 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 SDR42E1Q8WUS8 393 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 SMPDL3AQ92484 453 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 GLYATL1Q969I3 302 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 TMEM186Q96B77 213 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 PKP2Q99959 881 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 ZNF665Q9H7R5 613 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 MED20Q9H944 212 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 MARCH7Q9H992 704 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 SYTL2Q9HCH5 934 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 S100A14Q9HCY8 104 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 PAK5Q9P286 719 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 KLHL8Q9P2G9 620 aaPredicted RBP3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 LNPEPQ9UIQ6 1025 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 ODF2LQ9ULJ1 636 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 EXOC7Q9UPT5 735 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 MRPS2Q9Y399 296 aaKnown RBP3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 WIPI2Q9Y4P8 454 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 CSNK1G3Q9Y6M4 447 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 KIAA1671Q9BY89 1806 aa3.4□□□□□ -1.87
CDC42BPA-212ENST00000478573 COL4A4P53420 1690 aaPredicted RBP3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 IGKV6D-41A0A0C4DH26 115 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 A0A0J9YWU9 116 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 A0A0U1RQG5 324 aaPredicted RBP3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 KRTAP16-1A8MUX0 517 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 HIP1O00291 1037 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 ARHGEF9O43307 516 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 MAGEC1O60732 1142 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 NXPH2O95156 264 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 ANGPTL1O95841 491 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 CXCL10P02778 98 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 SFTPBP07988 381 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 ZNF18P17022 549 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 GAP43P17677 238 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 GIFP27352 417 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 STIP1P31948 543 aaKnown RBP3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 MMP12P39900 470 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 NSFP46459 744 aaKnown RBP3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 TDO2P48775 406 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 KCNK10P57789 538 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 CCNA1P78396 465 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 IL1RL1Q01638 556 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 HSPA14Q0VDF9 509 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 WASHC5Q12768 1159 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 GAMTQ14353 236 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 ALX1Q15699 326 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 C3AR1Q16581 482 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 WLSQ5T9L3 541 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 TMEM64Q6YI46 380 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 FRRS1Q6ZNA5 592 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 CHMP1BQ7LBR1 199 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 ZER1Q7Z7L7 766 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 BATF2Q8N1L9 274 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 OR52E1Q8NGJ3 308 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 RAET1EQ8TD07 263 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 PRCCQ92733 491 aaPredicted RBP3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 SLCO2A1Q92959 643 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 LINC00479Q96M42 142 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 SPATA13Q96N96 652 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 ZNF577Q9BSK1 485 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 TRIM15Q9C019 465 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 TRPV6Q9H1D0 765 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 GANQ9H2C0 597 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 RWDD1Q9H446 243 aaPredicted RBP3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 VCPKMTQ9H867 229 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 PLEK2Q9NYT0 353 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 NYAP2Q9P242 653 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 KCNN3Q9UGI6 736 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 STRAPQ9Y3F4 350 aaKnown RBP3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 CCDC171Q6TFL3 1326 aa3.39□□□□□ -1.87
CDC42BPA-212ENST00000478573 BRCA2P51587 3418 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 IQCMA0A1B0GVH7 501 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 K7EQD1 137 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 MPHOSPH10O00566 681 aaKnown RBP3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 OGTO15294 1046 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 SIGLEC5O15389 551 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 PRKAB2O43741 272 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 HSF2BPO75031 334 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms