RNA–Protein interactions for RNA: ENST00000476143.6

TMCO1-205, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-205ENST00000476143 TRAPPC6AO75865 159 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 HOXD4P09016 255 aaPredicted RBP12.67□□□□□ -0.38
TMCO1-205ENST00000476143 GABRA1P14867 456 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 DDCP20711 480 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 ELAVL4P26378 380 aaKnown RBP12.67□□□□□ -0.38
TMCO1-205ENST00000476143 ACVR2AP27037 513 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 PTGER4P35408 488 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 PPICP45877 212 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 FOXA1P55317 472 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 MRPS35P82673 323 aaKnown RBP12.67□□□□□ -0.38
TMCO1-205ENST00000476143 EXOSC7Q15024 291 aaKnown RBP12.67□□□□□ -0.38
TMCO1-205ENST00000476143 NNATQ16517 81 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 GXYLT1Q4G148 440 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 WDR93Q6P2C0 686 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 B3GNT6Q6ZMB0 384 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 NUP54Q7Z3B4 507 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 TRIM46Q7Z4K8 759 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 FGD2Q7Z6J4 655 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 TRABD2AQ86V40 505 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 C10orf107Q8IVU9 208 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 CHERPQ8IWX8 916 aaKnown RBP12.67□□□□□ -0.38
TMCO1-205ENST00000476143 PRR22Q8IZ63 422 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 MMP21Q8N119 569 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 OR10Q1Q8NGQ4 319 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 OR9A2Q8NGT5 310 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 OR2W6PQ8NHA6 318 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 CTHRC1Q96CG8 243 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 DMRTA2Q96SC8 542 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 ITPAQ9BY32 194 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 NXF5Q9H1B4 397 aaKnown RBP12.67□□□□□ -0.38
TMCO1-205ENST00000476143 ACKR4Q9NPB9 350 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 ALKBH4Q9NXW9 302 aa12.67□□□□□ -0.38
TMCO1-205ENST00000476143 POLR3HQ9Y535 204 aaPredicted RBP12.67□□□□□ -0.38
TMCO1-205ENST00000476143 DNAJC13O75165 2243 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 C15orf38-AP3S2A0A0A6YYH1 394 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 FRG2CA6NGY1 282 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 LRATO95237 230 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 PCSK2P16519 638 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 DRD5P21918 477 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 IL12BP29460 328 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 CHRNB4P30926 498 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 NCBP2P52298 156 aaKnown RBP eCLIP12.66□□□□□ -0.38
TMCO1-205ENST00000476143 RAE1P78406 368 aaKnown RBP12.66□□□□□ -0.38
TMCO1-205ENST00000476143 SNTA1Q13424 505 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 PCLAFQ15004 111 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 ZNHIT3Q15649 155 aaPredicted RBP12.66□□□□□ -0.38
TMCO1-205ENST00000476143 LTB4RQ15722 352 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 TRMT12Q53H54 448 aaKnown RBP12.66□□□□□ -0.38
TMCO1-205ENST00000476143 ZNF628Q5EBL2 1059 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 SLC30A6Q6NXT4 461 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 FAM180BQ6P0A1 224 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 TMEM64Q6YI46 380 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 TICAM1Q8IUC6 712 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 OR5M9Q8NGP3 310 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 OR1J4Q8NGS1 313 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 PPP1R14CQ8TAE6 165 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 CAVIN3Q969G5 261 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 OMA1Q96E52 524 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 ZNF681Q96N22 645 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 FAM111AQ96PZ2 611 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 OSBPL11Q9BXB4 747 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 ANGPTL4Q9BY76 406 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 LRTM1Q9HBL6 345 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 MYNNQ9NPC7 610 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 PNPLA3Q9NST1 481 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 C1orf109Q9NX04 203 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 LGALS13Q9UHV8 139 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 ZNF639Q9UID6 485 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 MRTO4Q9UKD2 239 aaKnown RBP12.66□□□□□ -0.38
TMCO1-205ENST00000476143 OR10H1Q9Y4A9 318 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 LIPGQ9Y5X9 500 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 ZNF407Q9C0G0 2248 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 PCNX1Q96RV3 2341 aa12.66□□□□□ -0.38
TMCO1-205ENST00000476143 NINQ8N4C6 2090 aa12.65□□□□□ -0.38
TMCO1-205ENST00000476143 NPHS1O60500 1241 aa12.65□□□□□ -0.38
TMCO1-205ENST00000476143 ERN1O75460 977 aaKnown RBP12.65□□□□□ -0.38
TMCO1-205ENST00000476143 REM1O75628 298 aa12.65□□□□□ -0.38
TMCO1-205ENST00000476143 CBX7O95931 251 aa12.65□□□□□ -0.38
TMCO1-205ENST00000476143 TUBBP07437 444 aa12.65□□□□□ -0.38
TMCO1-205ENST00000476143 ABCB1P08183 1280 aaPredicted RBP12.65□□□□□ -0.38
TMCO1-205ENST00000476143 S1PR1P21453 382 aa12.65□□□□□ -0.38
TMCO1-205ENST00000476143 MAPK1P28482 360 aa12.65□□□□□ -0.38
TMCO1-205ENST00000476143 SERPINB5P36952 375 aa12.65□□□□□ -0.38
TMCO1-205ENST00000476143 CASP3P42574 277 aa12.65□□□□□ -0.38
TMCO1-205ENST00000476143 MGAT2Q10469 447 aa12.65□□□□□ -0.38
TMCO1-205ENST00000476143 ZNF155Q12901 538 aaPredicted RBP12.65□□□□□ -0.38
TMCO1-205ENST00000476143 EFR3AQ14156 821 aa12.65□□□□□ -0.38
TMCO1-205ENST00000476143 CLEC6AQ6EIG7 209 aa12.65□□□□□ -0.38
TMCO1-205ENST00000476143 NOXRED1Q6NXP6 359 aa12.65□□□□□ -0.38
TMCO1-205ENST00000476143 GDF7Q7Z4P5 450 aa12.65□□□□□ -0.38
TMCO1-205ENST00000476143 DDIASQ8IXT1 998 aa12.65□□□□□ -0.38
TMCO1-205ENST00000476143 PM20D2Q8IYS1 436 aa12.65□□□□□ -0.38
TMCO1-205ENST00000476143 BANPQ8N9N5 519 aa12.65□□□□□ -0.38
TMCO1-205ENST00000476143 ZFP28Q8NHY6 868 aa12.65□□□□□ -0.38
TMCO1-205ENST00000476143 AENQ8WTP8 325 aaKnown RBP12.65□□□□□ -0.38
TMCO1-205ENST00000476143 KAT2AQ92830 837 aa12.65□□□□□ -0.38
TMCO1-205ENST00000476143 TMEM41AQ96HV5 264 aa12.65□□□□□ -0.38
TMCO1-205ENST00000476143 GATA5Q9BWX5 397 aaPredicted RBP12.65□□□□□ -0.38
TMCO1-205ENST00000476143 DDX18Q9NVP1 670 aaKnown RBP12.65□□□□□ -0.38
TMCO1-205ENST00000476143 TMED5Q9Y3A6 229 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms