RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 STMND1H3BQB6 276 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 I3L1I5 382 aaPredicted RBP6.57□□□□□ -1.36
SHQ1-207ENST00000475558 FXYD1O00168 92 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 NME4O00746 187 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 ACOT8O14734 319 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 PGRMC2O15173 223 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 HNRNPRO43390 633 aaKnown RBP6.57□□□□□ -1.36
SHQ1-207ENST00000475558 OR10H2O60403 315 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 CPNE3O75131 537 aaKnown RBP6.57□□□□□ -1.36
SHQ1-207ENST00000475558 SERPINB7O75635 380 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 SCRG1O75711 98 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 C6orf47O95873 294 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 TNNI3P19429 210 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 GGT1P19440 569 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 WT1P19544 449 aaPredicted RBP6.57□□□□□ -1.36
SHQ1-207ENST00000475558 ENDOUP21128 410 aaKnown RBP6.57□□□□□ -1.36
SHQ1-207ENST00000475558 MATN1P21941 496 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 FBLP22087 321 aaKnown RBP6.57□□□□□ -1.36
SHQ1-207ENST00000475558 PSMA4P25789 261 aaKnown RBP6.57□□□□□ -1.36
SHQ1-207ENST00000475558 PTPN6P29350 595 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 SLC7A1P30825 629 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 CSF2RBP32927 897 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 GCKP35557 465 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 ETV5P41161 510 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 CASRP41180 1078 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 CRATP43155 626 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 GSK3BP49841 420 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 DCAF7P61962 342 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 IGLV3-21P80748 117 aaPredicted RBP6.57□□□□□ -1.36
SHQ1-207ENST00000475558 PLIN5Q00G26 463 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 SLC13A2Q13183 592 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 KCNAB2Q13303 367 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 GK3PQ14409 553 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 CAPRIN1Q14444 709 aaKnown RBP6.57□□□□□ -1.36
SHQ1-207ENST00000475558 ZNHIT3Q15649 155 aaPredicted RBP6.57□□□□□ -1.36
SHQ1-207ENST00000475558 CYP51A1Q16850 503 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 SPRED3Q2MJR0 410 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 VMACQ2NL98 169 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 FAM98BQ52LJ0 330 aaKnown RBP6.57□□□□□ -1.36
SHQ1-207ENST00000475558 C4orf17Q53FE4 359 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 AP1ARQ63HQ0 302 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 SAXO2Q658L1 398 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 C18orf63Q68DL7 685 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 CLEC18BQ6UXF7 455 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 OVCH1Q7RTY7 1134 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 PATL1Q86TB9 770 aaKnown RBP6.57□□□□□ -1.36
SHQ1-207ENST00000475558 ANKRD46Q86W74 232 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 CALHM3Q86XJ0 350 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 KRT73Q86Y46 540 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 MICU2Q8IYU8 434 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 FAM26EQ8N5C1 309 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 CLEC18CQ8NCF0 446 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 OR9A4Q8NGU2 314 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 OR1L3Q8NH93 324 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 FBXO27Q8NI29 283 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 METTL21AQ8WXB1 218 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 UTP4Q969X6 686 aaKnown RBP6.57□□□□□ -1.36
SHQ1-207ENST00000475558 MIEF2Q96C03 454 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 CLIP3Q96DZ5 547 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 ELP4Q96EB1 424 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 C10orf90Q96M02 699 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 DGAT2Q96PD7 388 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 ZNF607Q96SK3 696 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 INPP5KQ9BT40 448 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 DDA1Q9BW61 102 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 YIPF2Q9BWQ6 316 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 OSBPL10Q9BXB5 764 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 ACTRT3Q9BYD9 372 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 ALOXE3Q9BYJ1 711 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 AICDAQ9GZX7 198 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 SLC26A1Q9H2B4 701 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 GLIPR2Q9H4G4 154 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 ARMC7Q9H6L4 198 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 WDR54Q9H977 334 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 OLAHQ9NV23 265 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 ADPRHL2Q9NX46 363 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 TEX10Q9NXF1 929 aaPredicted RBP6.57□□□□□ -1.36
SHQ1-207ENST00000475558 SLC39A1Q9NY26 324 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 FOXJ2Q9P0K8 574 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 C6orf203Q9P0P8 240 aaPredicted RBP6.57□□□□□ -1.36
SHQ1-207ENST00000475558 SLAMF8Q9P0V8 285 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 STOML1Q9UBI4 398 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 TRPC4Q9UBN4 977 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 C19orf25Q9UFG5 118 aaPredicted RBP6.57□□□□□ -1.36
SHQ1-207ENST00000475558 GPN3Q9UHW5 284 aaPredicted RBP6.57□□□□□ -1.36
SHQ1-207ENST00000475558 BAG5Q9UL15 447 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 ZNF232Q9UNY5 417 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 C19orf53Q9UNZ5 99 aaPredicted RBP6.57□□□□□ -1.36
SHQ1-207ENST00000475558 PCDHGA3Q9Y5H0 932 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 SNX8Q9Y5X2 465 aa6.57□□□□□ -1.36
SHQ1-207ENST00000475558 RP1L1Q8IWN7 2480 aaPredicted RBP6.56□□□□□ -1.36
SHQ1-207ENST00000475558 ARHGEF17Q96PE2 2063 aaPredicted RBP6.56□□□□□ -1.36
SHQ1-207ENST00000475558 A0A0G2JN53 185 aa6.56□□□□□ -1.36
SHQ1-207ENST00000475558 A0A0G2JPF8 293 aa6.56□□□□□ -1.36
SHQ1-207ENST00000475558 RNF103-CHMP3A0A140T963 221 aa6.56□□□□□ -1.36
SHQ1-207ENST00000475558 EFCAB7A8K855 629 aa6.56□□□□□ -1.36
SHQ1-207ENST00000475558 HNRNPCL2B2RXH8 293 aa6.56□□□□□ -1.36
SHQ1-207ENST00000475558 HNRNPCL3B7ZW38 293 aa6.56□□□□□ -1.36
SHQ1-207ENST00000475558 C9J4A7 227 aa6.56□□□□□ -1.36
SHQ1-207ENST00000475558 ANKRD65E5RJM6 399 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms