RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, human

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSS-208	ENST00000474319	ECHDC3	Q96DC8	303 aa		10.14	□□□□□ -0.79
LSS-208	ENST00000474319	FRMD6	Q96NE9	622 aa		10.14	□□□□□ -0.79
LSS-208	ENST00000474319	SLC22A4	Q9H015	551 aa		10.14	□□□□□ -0.79
LSS-208	ENST00000474319	PLCXD1	Q9NUJ7	323 aa		10.14	□□□□□ -0.79
LSS-208	ENST00000474319	MCUB	Q9NWR8	336 aa		10.14	□□□□□ -0.79
LSS-208	ENST00000474319	NKIRAS2	Q9NYR9	191 aa		10.14	□□□□□ -0.79
LSS-208	ENST00000474319	RPL36	Q9Y3U8	105 aa	Known RBP	10.14	□□□□□ -0.79
LSS-208	ENST00000474319	KLK4	Q9Y5K2	254 aa		10.14	□□□□□ -0.79
LSS-208	ENST00000474319	PLXND1	Q9Y4D7	1925 aa		10.14	□□□□□ -0.79
LSS-208	ENST00000474319	ZDBF2	Q9HCK1	2354 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	IGLV3-16	A0A075B6K0	115 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	MAGEB4	O15481	346 aa	Predicted RBP	10.13	□□□□□ -0.79
LSS-208	ENST00000474319	SCO1	O75880	301 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	NR2F6	P10588	404 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	PPM1F	P49593	454 aa	Predicted RBP	10.13	□□□□□ -0.79
LSS-208	ENST00000474319	PNLIPRP1	P54315	467 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	FABP5	Q01469	135 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	FCHO2	Q0JRZ9	810 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	SDE2	Q6IQ49	451 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	LILRA6	Q6PI73	481 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	TMEM107	Q6UX40	140 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	ADIPOR2	Q86V24	386 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	TRIM69	Q86WT6	500 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	LAS2	Q8IYD9	372 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	ZNF614	Q8N883	585 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	OR8K5	Q8NH50	307 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	OVCA2	Q8WZ82	227 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	SNAPC3	Q92966	411 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	RPP25	Q9BUL9	199 aa	Known RBP	10.13	□□□□□ -0.79
LSS-208	ENST00000474319	SPHK2	Q9NRA0	654 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	SLC23A2	Q9UGH3	650 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	IL36A	Q9UHA7	158 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	IRAK3	Q9Y616	596 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	LAMA1	P25391	3075 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319		B4DXG7	233 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	GNB5	O14775	395 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	KLHL18	O94889	574 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	RB1	P06400	928 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	KRR1	Q13601	381 aa	Known RBP	10.13	□□□□□ -0.79
LSS-208	ENST00000474319	WSCD2	Q2TBF2	565 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	SYT14P1	Q58G82	188 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	HENMT1	Q5T8I9	393 aa	Known RBP	10.13	□□□□□ -0.79
LSS-208	ENST00000474319	PIP5KL1	Q5T9C9	394 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	ZNF730	Q6ZMV8	503 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	GPR155	Q7Z3F1	870 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	FAM129C	Q86XR2	697 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	KLB	Q86Z14	1044 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	ANKRD53	Q8N9V6	530 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	OR6C4	Q8NGE1	309 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	OR51G2	Q8NGK0	314 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	OR56A3	Q8NH54	315 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	PIGK	Q92643	395 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	KCTD7	Q96MP8	289 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	OR2B2	Q9GZK3	357 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	RHBG	Q9H310	441 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	TRIM45	Q9H8W5	580 aa	Predicted RBP	10.13	□□□□□ -0.79
LSS-208	ENST00000474319	MOV10	Q9HCE1	1003 aa	Known RBP	10.13	□□□□□ -0.79
LSS-208	ENST00000474319	MRPL15	Q9P015	296 aa	Known RBP	10.13	□□□□□ -0.79
LSS-208	ENST00000474319	REV1	Q9UBZ9	1251 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	HS3ST2	Q9Y278	367 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	OR1A2	Q9Y585	309 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	PRAMEF27	A3QJZ7	478 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	CAPN5	O15484	640 aa	Predicted RBP	10.13	□□□□□ -0.79
LSS-208	ENST00000474319	MSL3P1	P0C860	447 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	GNS	P15586	552 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	PRPH2	P23942	346 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	IL12RB1	P42701	662 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	HYAL2	Q12891	473 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	SAXO2	Q658L1	398 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	MSANTD1	Q6ZTZ1	278 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	VN1R5	Q7Z5H4	357 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	NOXA1	Q86UR1	476 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	C17orf64	Q86WR6	236 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	VRK2	Q86Y07	508 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	BEST4	Q8NFU0	473 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	ZSCAN5A	Q9BUG6	496 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	WSB2	Q9NYS7	404 aa	Predicted RBP	10.13	□□□□□ -0.79
LSS-208	ENST00000474319	SEC14L4	Q9UDX3	406 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	ZNF222	Q9UK12	451 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	KCNK6	Q9Y257	313 aa		10.13	□□□□□ -0.79
LSS-208	ENST00000474319	SLC5A10	A0PJK1	596 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	OTOL1	A6NHN0	477 aa	Predicted RBP	10.12	□□□□□ -0.79
LSS-208	ENST00000474319	HMGN4	O00479	90 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	TOX	O94900	526 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	PCDH8	O95206	1070 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	PAH	P00439	452 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	CLCNKA	P51800	687 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	HTRA4	P83105	476 aa	Predicted RBP	10.12	□□□□□ -0.79
LSS-208	ENST00000474319	EIF4H	Q15056	248 aa	Known RBP	10.12	□□□□□ -0.79
LSS-208	ENST00000474319	CDK10	Q15131	360 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	TMEM31	Q5JXX7	168 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	C9orf64	Q5T6V5	341 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	C12orf40	Q86WS4	652 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	SHISA5	Q8N114	240 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	SIMC1	Q8NDZ2	872 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	C9orf43	Q8TAL5	461 aa	Predicted RBP	10.12	□□□□□ -0.79
LSS-208	ENST00000474319	SLC7A6	Q92536	515 aa		10.12	□□□□□ -0.79
LSS-208	ENST00000474319	TFG	Q92734	400 aa	Predicted RBP	10.12	□□□□□ -0.79
LSS-208	ENST00000474319	C11orf24	Q96F05	449 aa	Predicted RBP	10.12	□□□□□ -0.79
LSS-208	ENST00000474319	KATNB1	Q9BVA0	655 aa		10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms