RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 A0A0J9YYE9 177 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 METTL21EPA6NDL7 271 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 C1orf196B1AJZ1 125 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 MCIDASD6RGH6 385 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 GNGT2O14610 69 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 PIP5K1CO60331 668 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 MATN4O95460 622 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 MOCS2O96007 188 aaPredicted RBP4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 CST1P01037 141 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 HAPLN1P10915 354 aaPredicted RBP4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 NR2C1P13056 603 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 CBR1P16152 277 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 IGFBP5P24593 272 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 HRH2P25021 359 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 ITGA3P26006 1051 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 ACLYP53396 1101 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 LIMK2P53671 638 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 LGALS4P56470 323 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 CARD18P57730 90 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 DYNLT1P63172 113 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 CUL2Q13617 745 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 HNF4GQ14541 408 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 SLC35G1Q2M3R5 365 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 CR1LQ2VPA4 569 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 SOWAHCQ53LP3 525 aaPredicted RBP4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 INO80DQ53TQ3 878 aaPredicted RBP4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 CYB5R2Q6BCY4 276 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 FRMPD2BQ6IN97 320 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 ZNF790Q6PG37 636 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 SPESP1Q6UW49 350 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 RABEPKQ7Z6M1 372 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 ZFAND4Q86XD8 727 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 TGIF2LXQ8IUE1 241 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 FUNDC1Q8IVP5 155 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 MIER2Q8N344 545 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 CLDN22Q8N7P3 220 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 DCBLD1Q8N8Z6 715 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 SLC24A4Q8NFF2 622 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 MRPL38Q96DV4 380 aaKnown RBP4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 OTUB1Q96FW1 271 aaPredicted RBP4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 DIRAS2Q96HU8 199 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 CAMK1GQ96NX5 476 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 C11orf70Q9BRQ4 267 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 BARHL1Q9BZE3 327 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 EML4Q9HC35 981 aaKnown RBP4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 PSORS1C1Q9UIG5 152 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 BTRCQ9Y297 605 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 COQ4Q9Y3A0 265 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 NPTNQ9Y639 398 aa4.86□□□□□ -1.63
TMEM39A-206ENST00000473684 DISC1C4P0D8 188 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 H7C1Q1 480 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 NR5A2O00482 541 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 DCLK1O15075 740 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 PRKYO43930 277 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 C22orf31O95567 290 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 SERPINA5P05154 406 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 FGF4P08620 206 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 POU2F2P09086 479 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 SNRPA1P09661 255 aaKnown RBP4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 LINC00614P0C842 121 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 SLC2A1P11166 492 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 NCK1P16333 377 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 DCTP40126 519 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 HTR5AP47898 357 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 INPP1P49441 399 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 SUCLG1P53597 346 aaKnown RBP4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 ADPRHP54922 357 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 BCAR1P56945 870 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 DNAJB13P59910 316 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 MBTD1Q05BQ5 628 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 CYP24A1Q07973 514 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 CRYZQ08257 329 aaKnown RBP4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 TDGQ13569 410 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 HABP2Q14520 560 aaPredicted RBP4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 HADHQ16836 314 aaKnown RBP4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 ATAT1Q5SQI0 421 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 MBNL2Q5VZF2 373 aaKnown RBP4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 LIN54Q6MZP7 749 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 WASH2PQ6VEQ5 465 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 MSANTD1Q6ZTZ1 278 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 FAM122BQ7Z309 247 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 ABI3BPQ7Z7G0 1075 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 TRIM69Q86WT6 500 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 SLC34A3Q8N130 599 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 FTMTQ8N4E7 242 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 SLC44A5Q8NCS7 719 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 PPHLN1Q8NEY8 458 aaKnown RBP4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 OR1S1Q8NH92 325 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 MOSPD2Q8NHP6 518 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 STYXQ8WUJ0 223 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 SDR42E1Q8WUS8 393 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 KCNJ9Q92806 393 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 R3HDM4Q96D70 268 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 TSNAXQ99598 290 aaKnown RBP4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 PITX2Q99697 317 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 RBBP8Q99708 897 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 TCF25Q9BQ70 676 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 ENKD1Q9H0I2 346 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 OR51J1Q9H342 316 aa4.85□□□□□ -1.63
TMEM39A-206ENST00000473684 RNF167Q9H6Y7 350 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms