RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 DESI1Q6ICB0 168 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 RPUSD3Q6P087 351 aaKnown RBP12.11□□□□□ -0.47
TPM3-216ENST00000473036 IL20RBQ6UXL0 311 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 ACAD11Q709F0 780 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 ZNF551Q7Z340 670 aaPredicted RBP12.11□□□□□ -0.47
TPM3-216ENST00000473036 ANKS4BQ8N8V4 417 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 OR52R1Q8NGF1 315 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 ZNF764Q96H86 408 aaPredicted RBP12.11□□□□□ -0.47
TPM3-216ENST00000473036 MAELQ96JY0 434 aaKnown RBP12.11□□□□□ -0.47
TPM3-216ENST00000473036 GAL3ST4Q96RP7 486 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 ITPAQ9BY32 194 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 SH2D2AQ9NP31 389 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 MIEF1Q9NQG6 463 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 KLHL1Q9NR64 748 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 DEPPQ9NTK1 212 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 FGFR1OP2Q9NVK5 253 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 ASIC5Q9NY37 505 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 ATP6V1HQ9UI12 483 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 TRIM33Q9UPN9 1127 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 USH1CQ9Y6N9 552 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 NCKAP5O14513 1909 aa12.11□□□□□ -0.47
TPM3-216ENST00000473036 PINLYPA6NC86 204 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 OR6C76A6NM76 312 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 SCAMP2O15127 329 aaKnown RBP12.1□□□□□ -0.47
TPM3-216ENST00000473036 PSMG1O95456 288 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 SP1P08047 785 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 DCTP40126 519 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 MC3RP41968 323 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 CYB561P49447 251 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 CDK9P50750 372 aaKnown RBP12.1□□□□□ -0.47
TPM3-216ENST00000473036 NCBP2P52298 156 aaKnown RBP eCLIP12.1□□□□□ -0.47
TPM3-216ENST00000473036 PHC1P78364 1004 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 OC90Q02509 493 aaPredicted RBP12.1□□□□□ -0.47
TPM3-216ENST00000473036 ZNF791Q3KP31 576 aaPredicted RBP12.1□□□□□ -0.47
TPM3-216ENST00000473036 RNFT1Q5M7Z0 435 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 ZNF324BQ6AW86 544 aaPredicted RBP12.1□□□□□ -0.47
TPM3-216ENST00000473036 TMEM107Q6UX40 140 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 NPSR1Q6W5P4 371 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 GALNTL5Q7Z4T8 443 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 OR7G1Q8NGA0 311 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 OR5L2Q8NGL0 311 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 CEP70Q8NHQ1 597 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 GRHL3Q8TE85 626 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 ART5Q96L15 291 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 TEX37Q96LM6 180 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 OR52B2Q96RD2 323 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 BBS4Q96RK4 519 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 CCT8L2Q96SF2 557 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 NXF5Q9H1B4 397 aaKnown RBP12.1□□□□□ -0.47
TPM3-216ENST00000473036 PROK2Q9HC23 129 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 ENTPD4Q9Y227 616 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 POLEQ07864 2286 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 HIVEP3Q5T1R4 2406 aa12.1□□□□□ -0.47
TPM3-216ENST00000473036 C2orf92A0A1B0GVN3 265 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 UPK1AO00322 258 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 FCHO1O14526 889 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 DYRK3O43781 588 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 NME2P1O60361 137 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 PLOD3O60568 738 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 SLC25A12O75746 678 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 CT45A8P0DMV1 189 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 CT45A9P0DMV2 189 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 PRPS2P11908 318 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 NME2P22392 152 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 ELAVL4P26378 380 aaKnown RBP12.09□□□□□ -0.47
TPM3-216ENST00000473036 MST1P26927 711 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 MAPK1P28482 360 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 ASMTP46597 345 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 NR0B1P51843 470 aaKnown RBP12.09□□□□□ -0.47
TPM3-216ENST00000473036 ARFIP2P53365 341 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 AQP5P55064 265 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 WNT3P56703 355 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 CLDN8P56748 225 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 C21orf58P58505 322 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 NNATQ16517 81 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 CT45A2Q5DJT8 189 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 TMEM198Q66K66 360 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 SLC25A25Q6KCM7 469 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 EPGNQ6UW88 154 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 SLC29A4Q7RTT9 530 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 SPATA21Q7Z572 469 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 WDR53Q7Z5U6 358 aaPredicted RBP12.09□□□□□ -0.47
TPM3-216ENST00000473036 PRR22Q8IZ63 422 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 CYP4Z2PQ8N1L4 340 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 ACTRT2Q8TDY3 377 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 COQ8BQ96D53 544 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 ELP4Q96EB1 424 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 VSTM2LQ96N03 204 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 CCDC28BQ9BUN5 200 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 SIRT3Q9NTG7 399 aaPredicted RBP12.09□□□□□ -0.47
TPM3-216ENST00000473036 SH3BP4Q9P0V3 963 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 BCAP29Q9UHQ4 241 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 MAPRE3Q9UPY8 281 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 PCDHGB6Q9Y5F9 930 aa12.09□□□□□ -0.47
TPM3-216ENST00000473036 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 ASPDHA6ND91 283 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 G3V3Y1 287 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 PLOD2O00469 737 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 NDUFAB1O14561 156 aa12.08□□□□□ -0.48
TPM3-216ENST00000473036 PDPK1O15530 556 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms