RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 C1QL3Q5VWW1 255 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 PLAG1Q6DJT9 500 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 IKBIPQ70UQ0 350 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 LARP4Q71RC2 724 aaKnown RBP eCLIP8.48□□□□□ -1.054e-12■■■■□ 24.2
SMC4-213ENST00000472282 ST13P4Q8IZP2 240 aaPredicted RBP8.48□□□□□ -1.05
SMC4-213ENST00000472282 KIF2BQ8N4N8 673 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 BCORP1Q8N888 145 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 OR4K14Q8NGD5 310 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 OR14A16Q8NHC5 309 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 NR4A3Q92570 626 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 EXOSC8Q96B26 276 aaKnown RBP8.48□□□□□ -1.05
SMC4-213ENST00000472282 RNF32Q9H0A6 362 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 WDR55Q9H6Y2 383 aaPredicted RBP8.48□□□□□ -1.05
SMC4-213ENST00000472282 KCNK13Q9HB14 408 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 MIEF1Q9NQG6 463 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 STMN3Q9NZ72 180 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 BAIAP2L1Q9UHR4 511 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 UTS2RQ9UKP6 389 aa8.48□□□□□ -1.05
SMC4-213ENST00000472282 EXO1Q9UQ84 846 aaKnown RBP8.48□□□□□ -1.05
SMC4-213ENST00000472282 EIF3LQ9Y262 564 aaKnown RBP8.48□□□□□ -1.05
SMC4-213ENST00000472282 C17orf105B2RV13 164 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 ZNHIT1O43257 154 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 OR10H2O60403 315 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 PRAMEF2O60811 474 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 EDF1O60869 148 aaKnown RBP8.47□□□□□ -1.05
SMC4-213ENST00000472282 STSP08842 583 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 ALDOCP09972 364 aaKnown RBP8.47□□□□□ -1.05
SMC4-213ENST00000472282 SLC35E2P0CK97 266 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 G6PDP11413 515 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 PRPS2P11908 318 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 ICAM2P13598 275 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 CPMP14384 443 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 COX7A2P14406 83 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 PORP16435 677 aaPredicted RBP8.47□□□□□ -1.05
SMC4-213ENST00000472282 TNNI3P19429 210 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 GRNP28799 593 aaKnown RBP8.47□□□□□ -1.05
SMC4-213ENST00000472282 PTGER1P34995 402 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 FEN1P39748 380 aaKnown RBP8.47□□□□□ -1.05
SMC4-213ENST00000472282 CD96P40200 585 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 MDH1P40925 334 aaKnown RBP8.47□□□□□ -1.05
SMC4-213ENST00000472282 ASMTP46597 345 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 XKP51811 444 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 EMX2Q04743 252 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 BIKQ13323 160 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 TUBA3CQ13748 450 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 TERF2Q15554 542 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 EXT1Q16394 746 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 PRSS53Q2L4Q9 553 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 SMU1Q2TAY7 513 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 ZNF385BQ569K4 471 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 ACER2Q5QJU3 275 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 NXNQ6DKJ4 435 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 OGFOD2Q6N063 350 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 ANKRD26P1Q6NSI1 321 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 TUBA3EQ6PEY2 450 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 DGAT2L6Q6ZPD8 337 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 FJX1Q86VR8 437 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 TICAM1Q8IUC6 712 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 LURAP1LQ8IV03 231 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 MDS2Q8NDY4 140 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 NFAM1Q8NET5 270 aaPredicted RBP8.47□□□□□ -1.05
SMC4-213ENST00000472282 B3GNT7Q8NFL0 401 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 M1APQ8TC57 530 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 DOK4Q8TEW6 326 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 PTPMT1Q8WUK0 201 aaPredicted RBP8.47□□□□□ -1.05
SMC4-213ENST00000472282 DAZLQ92904 295 aaKnown RBP8.47□□□□□ -1.05
SMC4-213ENST00000472282 NCLNQ969V3 563 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 PPWD1Q96BP3 646 aaKnown RBP8.47□□□□□ -1.05
SMC4-213ENST00000472282 CNRIP1Q96F85 164 aaPredicted RBP8.47□□□□□ -1.05
SMC4-213ENST00000472282 THOC1Q96FV9 657 aaKnown RBP8.47□□□□□ -1.05
SMC4-213ENST00000472282 RBM18Q96H35 190 aaKnown RBP8.47□□□□□ -1.05
SMC4-213ENST00000472282 MAELQ96JY0 434 aaKnown RBP8.47□□□□□ -1.05
SMC4-213ENST00000472282 ZNF681Q96N22 645 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 OR52B2Q96RD2 323 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 PELOQ9BRX2 385 aaKnown RBP8.47□□□□□ -1.05
SMC4-213ENST00000472282 OR8D2Q9GZM6 311 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 REEP4Q9H6H4 257 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 SRA1Q9HD15 236 aaKnown RBP8.47□□□□□ -1.05
SMC4-213ENST00000472282 MMP25Q9NPA2 562 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 GIMAP4Q9NUV9 329 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 ASIC5Q9NY37 505 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 EHD3Q9NZN3 535 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 PSME2Q9UL46 239 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 ENTPD4Q9Y227 616 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 WBP11Q9Y2W2 641 aaKnown RBP8.47□□□□□ -1.05
SMC4-213ENST00000472282 CLCA3PQ9Y6N3 262 aa8.47□□□□□ -1.05
SMC4-213ENST00000472282 NCKAP5O14513 1909 aa8.46□□□□□ -1.05
SMC4-213ENST00000472282 TRBV11-1A0A0K0K1C0 115 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 HRKO00198 91 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 SCAMP2O15127 329 aaKnown RBP8.46□□□□□ -1.06
SMC4-213ENST00000472282 PDPK1O15530 556 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 UNC5CO95185 931 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 RASAL1O95294 804 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 CSNK2A2P19784 350 aaPredicted RBP8.46□□□□□ -1.06
SMC4-213ENST00000472282 NT5EP21589 574 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 HPCAL1P37235 193 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 AQP5P55064 265 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 DIO3P55073 304 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 AP2B1P63010 937 aa8.46□□□□□ -1.06
SMC4-213ENST00000472282 PDE7AQ13946 482 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms