RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 CPSF7Q8N684 471 aaKnown RBP11.4□□□□□ -0.58
PRKCB-205ENST00000472066 SLC15A4Q8N697 577 aa11.4□□□□□ -0.58
PRKCB-205ENST00000472066 C17orf47Q8NEP4 570 aa11.4□□□□□ -0.58
PRKCB-205ENST00000472066 NUP43Q8NFH3 380 aa11.4□□□□□ -0.58
PRKCB-205ENST00000472066 OR4A15Q8NGL6 344 aa11.4□□□□□ -0.58
PRKCB-205ENST00000472066 C10orf82Q8WW14 230 aa11.4□□□□□ -0.58
PRKCB-205ENST00000472066 SLC39A7Q92504 469 aa11.4□□□□□ -0.58
PRKCB-205ENST00000472066 VSTM2LQ96N03 204 aa11.4□□□□□ -0.58
PRKCB-205ENST00000472066 UTP23Q9BRU9 249 aaKnown RBP11.4□□□□□ -0.58
PRKCB-205ENST00000472066 ITPAQ9BY32 194 aa11.4□□□□□ -0.58
PRKCB-205ENST00000472066 MFRPQ9BY79 579 aa11.4□□□□□ -0.58
PRKCB-205ENST00000472066 TRIM4Q9C037 500 aa11.4□□□□□ -0.58
PRKCB-205ENST00000472066 RABEP2Q9H5N1 569 aa11.4□□□□□ -0.58
PRKCB-205ENST00000472066 CXorf36Q9H7Y0 433 aa11.4□□□□□ -0.58
PRKCB-205ENST00000472066 TRIM45Q9H8W5 580 aaPredicted RBP11.4□□□□□ -0.58
PRKCB-205ENST00000472066 FOLH1BQ9HBA9 442 aa11.4□□□□□ -0.58
PRKCB-205ENST00000472066 NEUROD4Q9HD90 331 aa11.4□□□□□ -0.58
PRKCB-205ENST00000472066 TMEM45AQ9NWC5 275 aa11.4□□□□□ -0.58
PRKCB-205ENST00000472066 ANKRD10Q9NXR5 420 aa11.4□□□□□ -0.58
PRKCB-205ENST00000472066 BTNL2Q9UIR0 455 aa11.4□□□□□ -0.58
PRKCB-205ENST00000472066 PCDHGB4Q9UN71 923 aa11.4□□□□□ -0.58
PRKCB-205ENST00000472066 GPR55Q9Y2T6 319 aaPredicted RBP11.4□□□□□ -0.58
PRKCB-205ENST00000472066 CSAG2Q9Y5P2 127 aa11.4□□□□□ -0.58
PRKCB-205ENST00000472066 SNX8Q9Y5X2 465 aa11.4□□□□□ -0.58
PRKCB-205ENST00000472066 SCN2AQ99250 2005 aa11.4□□□□□ -0.59
PRKCB-205ENST00000472066 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 OR6B1O95007 311 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 CASRP41180 1078 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 CCT3P49368 545 aaKnown RBP11.39□□□□□ -0.59
PRKCB-205ENST00000472066 CYB561P49447 251 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 TNFSF10P50591 281 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 OC90Q02509 493 aaPredicted RBP11.39□□□□□ -0.59
PRKCB-205ENST00000472066 LRRC74AQ0VAA2 488 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 NADK2Q4G0N4 442 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 AGKQ53H12 422 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 SOWAHCQ53LP3 525 aaPredicted RBP11.39□□□□□ -0.59
PRKCB-205ENST00000472066 BLOC1S3Q6QNY0 202 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 OPN5Q6U736 354 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 TMEM64Q6YI46 380 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 Q6ZS92 163 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 ZNF227Q86WZ6 799 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 PTRH1Q86Y79 214 aaKnown RBP11.39□□□□□ -0.59
PRKCB-205ENST00000472066 TAGAPQ8N103 731 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 TEX19Q8NA77 164 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 SLC22A8Q8TCC7 542 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 VPS33AQ96AX1 596 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 FAM120BQ96EK7 910 aaKnown RBP11.39□□□□□ -0.59
PRKCB-205ENST00000472066 GIMAP5Q96F15 307 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 LCORQ96JN0 433 aaPredicted RBP11.39□□□□□ -0.59
PRKCB-205ENST00000472066 CCDC115Q96NT0 180 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 SIGLEC12Q96PQ1 595 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 BTBD9Q96Q07 612 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 FAM107BQ9H098 131 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 NSRP1Q9H0G5 558 aaKnown RBP11.39□□□□□ -0.59
PRKCB-205ENST00000472066 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.39□□□□□ -0.59
PRKCB-205ENST00000472066 NXF5Q9H1B4 397 aaKnown RBP11.39□□□□□ -0.59
PRKCB-205ENST00000472066 SLC52A3Q9NQ40 469 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 ZCCHC3Q9NUD5 404 aaKnown RBP11.39□□□□□ -0.59
PRKCB-205ENST00000472066 RYDENQ9NUL5 291 aaKnown RBP11.39□□□□□ -0.59
PRKCB-205ENST00000472066 CCDC167Q9P0B6 97 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 LRFN1Q9P244 771 aa11.39□□□□□ -0.59
PRKCB-205ENST00000472066 RALYQ9UKM9 306 aaKnown RBP11.39□□□□□ -0.59
PRKCB-205ENST00000472066 FRG2CA6NGY1 282 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 CCDC154A6NI56 674 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 TO15178 435 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 ACOX3O15254 700 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 SNX3O60493 162 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 ERN1O75460 977 aaKnown RBP11.38□□□□□ -0.59
PRKCB-205ENST00000472066 CT45A8P0DMV1 189 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 CT45A9P0DMV2 189 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 CD1EP15812 388 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 SOX3P41225 446 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 NRG3P56975 720 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 CORO7P57737 925 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 KCNK10P57789 538 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 PRR5P85299 388 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 ZNF155Q12901 538 aaPredicted RBP11.38□□□□□ -0.59
PRKCB-205ENST00000472066 KLRB1Q12918 225 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 RCAN2Q14206 197 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 TLR1Q15399 786 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 OR1C1Q15619 314 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 ZNF791Q3KP31 576 aaPredicted RBP11.38□□□□□ -0.59
PRKCB-205ENST00000472066 PLEKHN1Q494U1 663 aaPredicted RBP11.38□□□□□ -0.59
PRKCB-205ENST00000472066 SPDYE7PQ495Y7 208 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 CT45A2Q5DJT8 189 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 SPINK14Q6IE38 97 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 LYPD8Q6UX82 237 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 IL20RBQ6UXL0 311 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 MSANTD1Q6ZTZ1 278 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 SZRD1Q7Z422 152 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 GPALPP1Q8IXQ4 340 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 HORMAD2Q8N7B1 307 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 OR56A1Q8NGH5 318 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 GOT1L1Q8NHS2 421 aaPredicted RBP11.38□□□□□ -0.59
PRKCB-205ENST00000472066 SFXN5Q8TD22 340 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 ASB15Q8WXK1 588 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 MOAP1Q96BY2 351 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 HSPBAP1Q96EW2 488 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 PANX1Q96RD7 426 aa11.38□□□□□ -0.59
PRKCB-205ENST00000472066 INPP5KQ9BT40 448 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms