RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 MAGEB18Q96M61 343 aa14.11□□□□□ -0.15
SDC3-203ENST00000471567 ITPAQ9BY32 194 aa14.11□□□□□ -0.15
SDC3-203ENST00000471567 NXF5Q9H1B4 397 aaKnown RBP14.11□□□□□ -0.15
SDC3-203ENST00000471567 VPS4AQ9UN37 437 aa14.11□□□□□ -0.15
SDC3-203ENST00000471567 DTX4Q9Y2E6 619 aa14.11□□□□□ -0.15
SDC3-203ENST00000471567 GPR55Q9Y2T6 319 aaPredicted RBP14.11□□□□□ -0.15
SDC3-203ENST00000471567 NPFFR2Q9Y5X5 522 aa14.11□□□□□ -0.15
SDC3-203ENST00000471567 FRG2CA6NGY1 282 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 UPK1AO00322 258 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 ZNF195O14628 629 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 TO15178 435 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 PEX1O43933 1283 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 WISP1O95388 367 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 TGDSO95455 350 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 LAMP1P11279 417 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 EPHA3P29320 983 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 MC3RP41968 323 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 TMED10P49755 219 aaKnown RBP14.1□□□□□ -0.15
SDC3-203ENST00000471567 NTRK2Q16620 822 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 TMEM107Q6UX40 140 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 ZNF551Q7Z340 670 aaPredicted RBP14.1□□□□□ -0.15
SDC3-203ENST00000471567 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.1□□□□□ -0.15
SDC3-203ENST00000471567 SULF2Q8IWU5 870 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 ARFGAP2Q8N6H7 521 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 KRTCAP2Q8N6L1 136 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 ACTRT2Q8TDY3 377 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 NR4A3Q92570 626 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 VSTM2LQ96N03 204 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 BTBD9Q96Q07 612 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 DPY30Q9C005 99 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 BHLHE41Q9C0J9 482 aaPredicted RBP14.1□□□□□ -0.15
SDC3-203ENST00000471567 WDR55Q9H6Y2 383 aaPredicted RBP14.1□□□□□ -0.15
SDC3-203ENST00000471567 ANKRA2Q9H9E1 313 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 SH2D2AQ9NP31 389 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 SLCO1B3Q9NPD5 702 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 MED4Q9NPJ6 270 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 OLAHQ9NV23 265 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 DDX18Q9NVP1 670 aaKnown RBP14.1□□□□□ -0.15
SDC3-203ENST00000471567 NTMQ9P121 344 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 USH1CQ9Y6N9 552 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 SHANK1Q9Y566 2161 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 FASNP49327 2511 aaKnown RBP14.1□□□□□ -0.15
SDC3-203ENST00000471567 NBASA2RRP1 2371 aa14.1□□□□□ -0.15
SDC3-203ENST00000471567 GOLGA8QA0A0J9YX86 632 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 A0A1W2PRB8 838 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 GOLGA8OA6NCC3 632 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 TTC36A6NLP5 189 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 TCP11X1B4DZS4 312 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 GOLGA8NF8WBI6 632 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 TP53I11O14683 189 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 ERN1O75460 977 aaKnown RBP14.09□□□□□ -0.15
SDC3-203ENST00000471567 PSMG1O95456 288 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 P04436 131 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 EDN3P14138 238 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 CNR1P21554 472 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 GPC1P35052 558 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 SRSF11Q05519 484 aaKnown RBP14.09□□□□□ -0.15
SDC3-203ENST00000471567 HSPB3Q12988 150 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 LSM12Q3MHD2 195 aaKnown RBP14.09□□□□□ -0.15
SDC3-203ENST00000471567 SLC22A10Q63ZE4 541 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 MAVSQ7Z434 540 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 CEP70Q8NHQ1 597 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 PAQR8Q8TEZ7 354 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 OR5P2Q8WZ92 322 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 FRMD6Q96NE9 622 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 SECISBP2Q96T21 854 aaKnown RBP14.09□□□□□ -0.15
SDC3-203ENST00000471567 SLX1AQ9BQ83 275 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 DUSP26Q9BV47 211 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 FOLH1BQ9HBA9 442 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 SACM1LQ9NTJ5 587 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 AIG1Q9NVV5 245 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 CNIH4Q9P003 139 aa14.09□□□□□ -0.15
SDC3-203ENST00000471567 ANKRD28O15084 1053 aa14.08□□□□□ -0.16
SDC3-203ENST00000471567 CBX6O95503 412 aa14.08□□□□□ -0.16
SDC3-203ENST00000471567 ALDOCP09972 364 aaKnown RBP14.08□□□□□ -0.16
SDC3-203ENST00000471567 CT45A8P0DMV1 189 aa14.08□□□□□ -0.16
SDC3-203ENST00000471567 CT45A9P0DMV2 189 aa14.08□□□□□ -0.16
SDC3-203ENST00000471567 ABCD3P28288 659 aa14.08□□□□□ -0.16
SDC3-203ENST00000471567 MEOX1P50221 254 aa14.08□□□□□ -0.16
SDC3-203ENST00000471567 CLNS1AP54105 237 aaKnown RBP14.08□□□□□ -0.16
SDC3-203ENST00000471567 RPP38P78345 283 aaKnown RBP14.08□□□□□ -0.16
SDC3-203ENST00000471567 DPY19L1Q2PZI1 675 aa14.08□□□□□ -0.16
SDC3-203ENST00000471567 SLC9B1Q4ZJI4 515 aa14.08□□□□□ -0.16
SDC3-203ENST00000471567 CT45A2Q5DJT8 189 aa14.08□□□□□ -0.16
SDC3-203ENST00000471567 NXNQ6DKJ4 435 aa14.08□□□□□ -0.16
SDC3-203ENST00000471567 EPGNQ6UW88 154 aa14.08□□□□□ -0.16
SDC3-203ENST00000471567 SLC34A3Q8N130 599 aa14.08□□□□□ -0.16
SDC3-203ENST00000471567 ZFP62Q8NB50 900 aaPredicted RBP14.08□□□□□ -0.16
SDC3-203ENST00000471567 ST6GALNAC3Q8NDV1 305 aa14.08□□□□□ -0.16
SDC3-203ENST00000471567 OR8J2Q8NGG1 315 aa14.08□□□□□ -0.16
SDC3-203ENST00000471567 PSMA8Q8TAA3 256 aa14.08□□□□□ -0.16
SDC3-203ENST00000471567 TESCQ96BS2 214 aa14.08□□□□□ -0.16
SDC3-203ENST00000471567 FAM173AQ9BQD7 235 aa14.08□□□□□ -0.16
SDC3-203ENST00000471567 C3orf14Q9HBI5 128 aa14.08□□□□□ -0.16
SDC3-203ENST00000471567 CHCHD2Q9Y6H1 151 aaPredicted RBP14.08□□□□□ -0.16
SDC3-203ENST00000471567 RP1L1Q8IWN7 2480 aaPredicted RBP14.07□□□□□ -0.16
SDC3-203ENST00000471567 ANKRD33BA6NCL7 494 aa14.07□□□□□ -0.16
SDC3-203ENST00000471567 EMC8O43402 210 aa14.07□□□□□ -0.16
SDC3-203ENST00000471567 DIAPH2O60879 1101 aa14.07□□□□□ -0.16
SDC3-203ENST00000471567 PPM1BO75688 479 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms