RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 HCFC1P51610 2035 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 A0A088AWK7 358 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 SYNDIG1LA6NDD5 238 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 C4orf51C9J302 202 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 PLPP1O14494 284 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 ERI3O43414 337 aaKnown RBP8.39□□□□□ -1.07
SF3A1-206ENST00000471037 PCDH7O60245 1069 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 SH3BGRLO75368 114 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 ALDOCP09972 364 aaKnown RBP8.39□□□□□ -1.07
SF3A1-206ENST00000471037 NCF2P19878 526 aaPredicted RBP8.39□□□□□ -1.07
SF3A1-206ENST00000471037 ZNF10P21506 573 aaPredicted RBP8.39□□□□□ -1.07
SF3A1-206ENST00000471037 TIA1P31483 386 aaKnown RBP eCLIP8.39□□□□□ -1.07
SF3A1-206ENST00000471037 DNAJA1P31689 397 aaKnown RBP8.39□□□□□ -1.07
SF3A1-206ENST00000471037 SSR2P43308 183 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 GSTM5P46439 218 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 SSR4P51571 173 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 NUP107P57740 925 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 GPR85P60893 370 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 RAB8AP61006 207 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 SQLEQ14534 574 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 RPS6KA2Q15349 733 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 PDCD4Q53EL6 469 aaKnown RBP8.39□□□□□ -1.07
SF3A1-206ENST00000471037 IL23RQ5VWK5 629 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 FAM91A1Q658Y4 838 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 TMEM198Q66K66 360 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 NOXRED1Q6NXP6 359 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 ABHD17CQ6PCB6 329 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 PAOXQ6QHF9 649 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 COMMD6Q7Z4G1 85 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 MTDHQ86UE4 582 aaKnown RBP8.39□□□□□ -1.07
SF3A1-206ENST00000471037 NUDT13Q86X67 352 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 CA13Q8N1Q1 262 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 MIER2Q8N344 545 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 ZNF559Q9BR84 538 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 C1orf50Q9BV19 199 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 TMUB1Q9BVT8 246 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 BRINP2Q9C0B6 783 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 NMUR2Q9GZQ4 415 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 AICDAQ9GZX7 198 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 MYLK2Q9H1R3 596 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 CXXC4Q9H2H0 198 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 ZNF385DQ9H6B1 395 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 DDX31Q9H8H2 851 aaKnown RBP8.39□□□□□ -1.07
SF3A1-206ENST00000471037 SDR39U1Q9NRG7 319 aaPredicted RBP8.39□□□□□ -1.07
SF3A1-206ENST00000471037 DEPPQ9NTK1 212 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 TMEM45AQ9NWC5 275 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 MCM8Q9UJA3 840 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 FBXW2Q9UKT8 454 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 YARS2Q9Y2Z4 477 aaKnown RBP8.39□□□□□ -1.07
SF3A1-206ENST00000471037 POLR3HQ9Y535 204 aaPredicted RBP8.39□□□□□ -1.07
SF3A1-206ENST00000471037 GPR45Q9Y5Y3 372 aa8.39□□□□□ -1.07
SF3A1-206ENST00000471037 OR14I1A6ND48 311 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 TMEM200CA6NKL6 621 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 A8MUA0 341 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 TGFBR3LH3BV60 316 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 ACOT7O00154 380 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 SAP18O00422 153 aaKnown RBP8.38□□□□□ -1.07
SF3A1-206ENST00000471037 SCELO95171 688 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 IGHG3P01860 377 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 BCKDHAP12694 445 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 SDC1P18827 310 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 HIST1H1TP22492 207 aaPredicted RBP8.38□□□□□ -1.07
SF3A1-206ENST00000471037 BSGP35613 385 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 ASMTP46597 345 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 NR0B1P51843 470 aaKnown RBP8.38□□□□□ -1.07
SF3A1-206ENST00000471037 PLA2G16P53816 162 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 DIO3P55073 304 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 HSD17B7P56937 341 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 TRA2BP62995 288 aaKnown RBP8.38□□□□□ -1.07
SF3A1-206ENST00000471037 RAE1P78406 368 aaKnown RBP8.38□□□□□ -1.07
SF3A1-206ENST00000471037 ZNF763Q0D2J5 394 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 PMPCAQ10713 525 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 GXYLT1Q4G148 440 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 OR4C11Q6IEV9 310 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 CYP20A1Q6UW02 462 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 TRPM8Q7Z2W7 1104 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 UBE3DQ7Z6J8 389 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 CLNKQ7Z7G1 428 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 TMEM200AQ86VY9 491 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 CCDC71Q8IV32 467 aaPredicted RBP8.38□□□□□ -1.07
SF3A1-206ENST00000471037 ZCCHC7Q8N3Z6 543 aaKnown RBP8.38□□□□□ -1.07
SF3A1-206ENST00000471037 LIX1Q8N485 282 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 OR2M7Q8NG81 312 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 NINJ1Q92982 152 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 NCLNQ969V3 563 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 ERP27Q96DN0 273 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 SERINC2Q96SA4 455 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 FOXC2Q99958 501 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 NPLQ9BXD5 320 aaPredicted RBP8.38□□□□□ -1.07
SF3A1-206ENST00000471037 ZNF717Q9BY31 904 aaPredicted RBP8.38□□□□□ -1.07
SF3A1-206ENST00000471037 KLHL31Q9H511 634 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 COPS7BQ9H9Q2 264 aaPredicted RBP8.38□□□□□ -1.07
SF3A1-206ENST00000471037 ADAP2Q9NPF8 381 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 ZIM2Q9NZV7 527 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 KCMF1Q9P0J7 381 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 MAPRE3Q9UPY8 281 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 ERVK-11Q9UQG0 969 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 DLGAP4Q9Y2H0 992 aa8.38□□□□□ -1.07
SF3A1-206ENST00000471037 WBP11Q9Y2W2 641 aaKnown RBP8.38□□□□□ -1.07
SF3A1-206ENST00000471037 CAPN7Q9Y6W3 813 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms