RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 SLC7A13Q8TCU3 470 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 GCDHQ92947 438 aaPredicted RBP7.52□□□□□ -1.21
TPM3-215ENST00000469717 CREB3L1Q96BA8 519 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 RBM14Q96PK6 669 aaKnown RBP7.52□□□□□ -1.21
TPM3-215ENST00000469717 ABHD1Q96SE0 405 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 CLEC4MQ9H2X3 399 aaPredicted RBP7.52□□□□□ -1.21
TPM3-215ENST00000469717 OR51J1Q9H342 316 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 SAV1Q9H4B6 383 aaPredicted RBP7.52□□□□□ -1.21
TPM3-215ENST00000469717 ENAMQ9NRM1 1142 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 GKN1Q9NS71 199 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 IMP3Q9NV31 184 aaKnown RBP7.52□□□□□ -1.21
TPM3-215ENST00000469717 EMC3Q9P0I2 261 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 FNIP2Q9P278 1114 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 SCML2Q9UQR0 700 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 MRPS7Q9Y2R9 242 aaKnown RBP7.52□□□□□ -1.21
TPM3-215ENST00000469717 RPL36Q9Y3U8 105 aaKnown RBP7.52□□□□□ -1.21
TPM3-215ENST00000469717 PCDHB1Q9Y5F3 818 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 TEX13CA0A0J9YWL9 993 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 A0A1W2PQ45 241 aaPredicted RBP7.52□□□□□ -1.21
TPM3-215ENST00000469717 A0A1W2PQY0 241 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 SLC22A23A1A5C7 686 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 KHNYNO15037 678 aaKnown RBP7.52□□□□□ -1.21
TPM3-215ENST00000469717 URODP06132 367 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 ELAVL4P26378 380 aaKnown RBP7.52□□□□□ -1.21
TPM3-215ENST00000469717 PTGER1P34995 402 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 IRS1P35568 1242 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 GBX2P52951 348 aaPredicted RBP7.52□□□□□ -1.21
TPM3-215ENST00000469717 KIAA1024LP59773 190 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 ZP1P60852 638 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 SP140Q13342 867 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 CLEC12AQ5QGZ9 265 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 LYPD4Q6UWN0 246 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 GPR32P1Q8NGA4 272 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 GANCQ8TET4 914 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 UBTD2Q8WUN7 234 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 CHTF18Q8WVB6 975 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 GEMIN6Q8WXD5 167 aaKnown RBP7.52□□□□□ -1.21
TPM3-215ENST00000469717 MED8Q96G25 268 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 ZNF582Q96NG8 517 aaPredicted RBP7.52□□□□□ -1.21
TPM3-215ENST00000469717 DMRTA2Q96SC8 542 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 DDOQ99489 341 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 THAP7Q9BT49 309 aaPredicted RBP7.52□□□□□ -1.21
TPM3-215ENST00000469717 EGLN3Q9H6Z9 239 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 WASH6PQ9NQA3 447 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 C1GALT1Q9NS00 363 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 SDHAF2Q9NX18 166 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 HCN3Q9P1Z3 774 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 FLVCR2Q9UPI3 526 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 ZFR2Q9UPR6 939 aaKnown RBP7.52□□□□□ -1.21
TPM3-215ENST00000469717 NCOR1O75376 2440 aa7.52□□□□□ -1.21
TPM3-215ENST00000469717 MGAT4DA6NG13 374 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 H3BNC9 293 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 IFNW1P05000 195 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 LIMS3P0CW19 117 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 LIMS4P0CW20 117 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 CSF2RAP15509 400 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 GAS1P54826 345 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 ERVFC1P60507 584 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 ERVK-21P61565 698 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 GINS1Q14691 196 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 CLVS2Q5SYC1 327 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 RNF219Q5W0B1 726 aaPredicted RBP7.51□□□□□ -1.21
TPM3-215ENST00000469717 CXorf57Q6NSI4 855 aaKnown RBP7.51□□□□□ -1.21
TPM3-215ENST00000469717 TCTN3Q6NUS6 607 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 ALKAL2Q6UX46 152 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 ADGRG3Q86Y34 549 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 ZNF527Q8NB42 609 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 TTLQ8NG68 377 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 KIAA1143Q96AT1 154 aaPredicted RBP7.51□□□□□ -1.21
TPM3-215ENST00000469717 SCMH1Q96GD3 660 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 COQ10AQ96MF6 247 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 TMEM175Q9BSA9 504 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 WRAP53Q9BUR4 548 aaKnown RBP7.51□□□□□ -1.21
TPM3-215ENST00000469717 ZCCHC4Q9H5U6 513 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 METTL17Q9H7H0 456 aaPredicted RBP7.51□□□□□ -1.21
TPM3-215ENST00000469717 THSD1Q9NS62 852 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 CUEDC1Q9NWM3 386 aaPredicted RBP7.51□□□□□ -1.21
TPM3-215ENST00000469717 OR6C2Q9NZP2 312 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 DOCK6Q96HP0 2047 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 A0A1W2PRG6 482 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 H7C0S8 307 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 GABRPO00591 440 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 GJB5O95377 273 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 RAB36O95755 333 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 ACRV1P26436 265 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 CTNNB1P35222 781 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 SNRPGP62308 76 aaKnown RBP7.51□□□□□ -1.21
TPM3-215ENST00000469717 B4GALNT1Q00973 533 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 MLLT1Q03111 559 aaPredicted RBP7.51□□□□□ -1.21
TPM3-215ENST00000469717 ABRQ12979 859 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 MELKQ14680 651 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 ANGPT1Q15389 498 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 SYT9Q86SS6 491 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 ZNF280BQ86YH2 543 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 GPALPP1Q8IXQ4 340 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 LINC00518Q8N0U6 118 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 AP3S1Q92572 193 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 REG4Q9BYZ8 158 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 GSX2Q9BZM3 304 aa7.51□□□□□ -1.21
TPM3-215ENST00000469717 BRD7Q9NPI1 651 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms