RNA–Protein interactions for RNA: ENST00000469543.5

VIM-203, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 2,666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-203ENST00000469543 ERVK-21P61565 698 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 TUBA1BP68363 451 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 ID2Q02363 134 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 ZNF91Q05481 1191 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 ENPP2Q13822 863 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 TJAP1Q5JTD0 557 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 SLX4IPQ5VYV7 408 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 ENPP7Q6UWV6 458 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 TUBA1AQ71U36 451 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 EGFL6Q8IUX8 553 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 LYSMD2Q8IV50 215 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 OR2L5Q8NG80 312 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 ADAM29Q9UKF5 820 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 PCDHGA4Q9Y5G9 962 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 ADH1BP00325 375 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 PPP2R1BP30154 601 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 UGT2B10P36537 528 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 AVPR1BP47901 424 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 CD97P48960 835 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 DLX2Q07687 328 aaPredicted RBP17.95■□□□□ 0.46
VIM-203ENST00000469543 MADCAM1Q13477 382 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 ITPRIPL2Q3MIP1 535 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 KIF18BQ86Y91 864 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 LRR1Q96L50 414 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 DHRS1Q96LJ7 313 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 FAIM2Q9BWQ8 316 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 TSSK6Q9BXA6 273 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 WBP11Q9Y2W2 641 aaKnown RBP17.95■□□□□ 0.46
VIM-203ENST00000469543 WDR87Q6ZQQ6 2873 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 ARRDC5A6NEK1 342 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 PROM1O43490 865 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 LGI1O95970 557 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 CH25HO95992 272 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 RPS19P39019 145 aaKnown RBP17.95■□□□□ 0.46
VIM-203ENST00000469543 GIPRP48546 466 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 MXD1Q05195 221 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 LIPKQ5VXJ0 399 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 MRM1Q6IN84 353 aaKnown RBP17.95■□□□□ 0.46
VIM-203ENST00000469543 AMER2Q8N7J2 671 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 SLC16A11Q8NCK7 471 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 MORN4Q8NDC4 146 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 ZCCHC10Q8TBK6 192 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 LCN9Q8WX39 176 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 OR7D2Q96RA2 312 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 ZNF624Q9P2J8 865 aaPredicted RBP17.95■□□□□ 0.46
VIM-203ENST00000469543 ZNF229Q9UJW7 825 aa17.95■□□□□ 0.46
VIM-203ENST00000469543 A0A087WUU8 490 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 SH3D21A4FU49 640 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 CCRL2O00421 344 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 SPNP16150 400 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 FLYWCH1Q4VC44 716 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 ZNF776Q68DI1 518 aaPredicted RBP17.94■□□□□ 0.46
VIM-203ENST00000469543 C12orf73Q69YU5 71 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 SLC48A1Q6P1K1 146 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 FAM111BQ6SJ93 734 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 PRICKLE2Q7Z3G6 844 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 VN1R4Q7Z5H5 301 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 KRT73Q86Y46 540 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 PATE1Q8WXA2 126 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 OR1E3Q8WZA6 343 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 C14orf119Q9NWQ9 140 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 ZNF860A6NHJ4 632 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 PRR19A6NJB7 356 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 CYP7B1O75881 506 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 MLC1Q15049 377 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 SPHARQ15513 63 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 FBXO43Q4G163 708 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 ZNF311Q5JNZ3 666 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 ANKRD54Q6NXT1 300 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 ELP4Q96EB1 424 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 CRELD1Q96HD1 420 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 TIMM29Q9BSF4 260 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 TMEM168Q9H0V1 697 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 SLC38A1Q9H2H9 487 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 ERVK13-1Q9NX77 482 aa17.94■□□□□ 0.46
VIM-203ENST00000469543 YARS2Q9Y2Z4 477 aaKnown RBP17.94■□□□□ 0.46
VIM-203ENST00000469543 CENPVL1A0A0U1RR11 272 aa17.93■□□□□ 0.46
VIM-203ENST00000469543 A0A1W2PQF6 199 aa17.93■□□□□ 0.46
VIM-203ENST00000469543 A0A1W2PRQ8 180 aa17.93■□□□□ 0.46
VIM-203ENST00000469543 PRSS38A1L453 326 aa17.93■□□□□ 0.46
VIM-203ENST00000469543 PLRG1O43660 514 aaKnown RBP17.93■□□□□ 0.46
VIM-203ENST00000469543 SSX4O60224 188 aa17.93■□□□□ 0.46
VIM-203ENST00000469543 UPK1BO75841 260 aa17.93■□□□□ 0.46
VIM-203ENST00000469543 ZNF888P0CJ79 500 aaPredicted RBP17.93■□□□□ 0.46
VIM-203ENST00000469543 LAMP2P13473 410 aa17.93■□□□□ 0.46
VIM-203ENST00000469543 F3P13726 295 aa17.93■□□□□ 0.46
VIM-203ENST00000469543 ALOX12P18054 663 aa17.93■□□□□ 0.46
VIM-203ENST00000469543 AGERQ15109 404 aa17.93■□□□□ 0.46
VIM-203ENST00000469543 DEFB134Q4QY38 66 aa17.93■□□□□ 0.46
VIM-203ENST00000469543 SYT14P1Q58G82 188 aa17.93■□□□□ 0.46
VIM-203ENST00000469543 OR2G6Q5TZ20 316 aa17.93■□□□□ 0.46
VIM-203ENST00000469543 AMIGO1Q86WK6 493 aa17.93■□□□□ 0.46
VIM-203ENST00000469543 IL17RCQ8NAC3 791 aa17.93■□□□□ 0.46
VIM-203ENST00000469543 NUP43Q8NFH3 380 aa17.93■□□□□ 0.46
VIM-203ENST00000469543 KLHL6Q8WZ60 621 aa17.93■□□□□ 0.46
VIM-203ENST00000469543 PPP1R14BQ96C90 147 aa17.93■□□□□ 0.46
VIM-203ENST00000469543 TAPBPLQ9BX59 468 aa17.93■□□□□ 0.46
VIM-203ENST00000469543 SEMA4GQ9NTN9 838 aa17.93■□□□□ 0.46
VIM-203ENST00000469543 CNOT2Q9NZN8 540 aaKnown RBP17.93■□□□□ 0.46
VIM-203ENST00000469543 LSM2Q9Y333 95 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms