RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 PPM1AP35813 382 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 CEACAM6P40199 344 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 GYG1P46976 350 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 RFX3P48380 749 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 POU3F4P49335 361 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 CSNK1EP49674 416 aaKnown RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 RBP2P50120 134 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 DAPP51397 102 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 ARFIP1P53367 373 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 ARPP19P56211 112 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 MAZP56270 477 aaKnown RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 OR4D2P58180 307 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 SNRPGP62308 76 aaKnown RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 CXADRP78310 365 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 KCNJ10P78508 379 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 SHC2P98077 582 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 DEFA5Q01523 94 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 YWHAHQ04917 246 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 SLC3A1Q07837 685 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 IL18Q14116 193 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 VEZF1Q14119 521 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 GRM7Q14831 915 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 UBXN2BQ14CS0 331 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 PAFAH1B3Q15102 231 aaKnown RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 SPHARQ15513 63 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 MED22Q15528 200 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 MPPED2Q15777 294 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 KCNA10Q16322 511 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 SGCAQ16586 387 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 TSTQ16762 297 aaKnown RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 FAM187BQ17R55 369 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 FLYWCH1Q4VC44 716 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 FBXO48Q5FWF7 155 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 XKR7Q5GH72 579 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 SLC25A30Q5SVS4 291 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 C10orf91Q5T1B1 145 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 FAM102AQ5T9C2 384 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 ANKS6Q68DC2 871 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF57Q68EA5 555 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 NPNTQ6UXI9 565 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 DLEU7Q6UYE1 221 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 C17orf107Q6ZR85 190 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 MOB2Q70IA6 237 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 ABHD13Q7L211 337 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 CHMP1BQ7LBR1 199 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 TMPRSS7Q7RTY8 843 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 MRPL52Q86TS9 123 aaKnown RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 SERPINA11Q86U17 422 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 LRRC28Q86X40 367 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 LAX1Q8IWV1 398 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 FAM217AQ8IXS0 508 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 CFAP206Q8IYR0 622 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 C7orf61Q8IZ16 206 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 OR6V1Q8N148 313 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 THEM5Q8N1Q8 247 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 FTMTQ8N4E7 242 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 WDTC1Q8N5D0 677 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 DTWD2Q8NBA8 298 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 TMEM145Q8NBT3 493 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 ATP6V1C2Q8NEY4 427 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 IPMKQ8NFU5 416 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 OR9I1Q8NGQ6 314 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 OR6K3Q8NGY3 331 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 JOSD2Q8TAC2 188 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 CEP76Q8TAP6 659 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 BAHD1Q8TBE0 780 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 RAET1EQ8TD07 263 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF384Q8TF68 577 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 CYB5D2Q8WUJ1 264 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 SLC5A11Q8WWX8 675 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 RXFP2Q8WXD0 754 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 ST8SIA2Q92186 375 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 DDX17Q92841 729 aaKnown RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 DNASE1L2Q92874 299 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 OSTF1Q92882 214 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 PYCR2Q96C36 320 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 FAM120BQ96EK7 910 aaKnown RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 ZBED6CLQ96FA7 236 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 TSNAXQ99598 290 aaKnown RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 BARD1Q99728 777 aaKnown RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 RTP3Q9BQQ7 232 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 NUDT16L1Q9BRJ7 211 aaKnown RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 MXRA8Q9BRK3 442 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 CNPPD1Q9BV87 410 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 PRRG3Q9BZD7 231 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 TINAGL1Q9GZM7 467 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 EGLN1Q9GZT9 426 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 ENKD1Q9H0I2 346 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 OR51V1Q9H2C8 321 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 TUBA4BQ9H853 241 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 CACYBPQ9HB71 228 aaKnown RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 GLOD4Q9HC38 313 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 GALNT9Q9HCQ5 603 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 CHMP1AQ9HD42 196 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 EXOSC4Q9NPD3 245 aaKnown RBP4.6□□□□□ -1.67
SF3B1-207ENST00000468925 STARD7Q9NQZ5 370 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 SNTG1Q9NSN8 517 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 C1orf109Q9NX04 203 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 GFOD1Q9NXC2 390 aa4.6□□□□□ -1.67
SF3B1-207ENST00000468925 MIOSQ9NXC5 875 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms