RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 PLLPQ9Y342 182 aa22.36■■□□□ 1.17
PTCH1-210ENST00000468211 A0A087WUV0 522 aaPredicted RBP22.35■■□□□ 1.17
PTCH1-210ENST00000468211 GOLGA6L10A6NI86 522 aa22.35■■□□□ 1.17
PTCH1-210ENST00000468211 SYT5O00445 386 aa22.35■■□□□ 1.17
PTCH1-210ENST00000468211 MANBAO00462 879 aa22.35■■□□□ 1.17
PTCH1-210ENST00000468211 GUCY1B2O75343 617 aa22.35■■□□□ 1.17
PTCH1-210ENST00000468211 NME6O75414 186 aaPredicted RBP22.35■■□□□ 1.17
PTCH1-210ENST00000468211 CTAG2O75638 210 aa22.35■■□□□ 1.17
PTCH1-210ENST00000468211 SNRPAP09012 282 aaKnown RBP22.35■■□□□ 1.17
PTCH1-210ENST00000468211 CSNK2A2P19784 350 aaPredicted RBP22.35■■□□□ 1.17
PTCH1-210ENST00000468211 UQCRC1P31930 480 aa22.35■■□□□ 1.17
PTCH1-210ENST00000468211 ALDH9A1P49189 494 aa22.35■■□□□ 1.17
PTCH1-210ENST00000468211 RIPPLY3P57055 190 aa22.35■■□□□ 1.17
PTCH1-210ENST00000468211 MRPS35P82673 323 aaKnown RBP22.35■■□□□ 1.17
PTCH1-210ENST00000468211 ANGPTL8Q6UXH0 198 aa22.35■■□□□ 1.17
PTCH1-210ENST00000468211 YRDCQ86U90 279 aaKnown RBP22.35■■□□□ 1.17
PTCH1-210ENST00000468211 CDYL2Q8N8U2 506 aa22.35■■□□□ 1.17
PTCH1-210ENST00000468211 OR52R1Q8NGF1 315 aa22.35■■□□□ 1.17
PTCH1-210ENST00000468211 ZNF592Q92610 1267 aa22.35■■□□□ 1.17
PTCH1-210ENST00000468211 OMA1Q96E52 524 aa22.35■■□□□ 1.17
PTCH1-210ENST00000468211 WDYHV1Q96HA8 205 aa22.35■■□□□ 1.17
PTCH1-210ENST00000468211 METTL7AQ9H8H3 244 aa22.35■■□□□ 1.17
PTCH1-210ENST00000468211 ANKRA2Q9H9E1 313 aa22.35■■□□□ 1.17
PTCH1-210ENST00000468211 DNAJB12Q9NXW2 375 aaKnown RBP22.35■■□□□ 1.17
PTCH1-210ENST00000468211 CRIM1Q9NZV1 1036 aa22.35■■□□□ 1.17
PTCH1-210ENST00000468211 CAMK2AQ9UQM7 478 aa22.35■■□□□ 1.17
PTCH1-210ENST00000468211 PRRC2AP48634 2157 aaKnown RBP22.35■■□□□ 1.17
PTCH1-210ENST00000468211 PCSK2P16519 638 aa22.34■■□□□ 1.17
PTCH1-210ENST00000468211 NAGAP17050 411 aa22.34■■□□□ 1.17
PTCH1-210ENST00000468211 KRT15P19012 456 aa22.34■■□□□ 1.17
PTCH1-210ENST00000468211 ZNF136P52737 540 aa22.34■■□□□ 1.17
PTCH1-210ENST00000468211 ART1P52961 327 aa22.34■■□□□ 1.17
PTCH1-210ENST00000468211 NAGLUP54802 743 aa22.34■■□□□ 1.17
PTCH1-210ENST00000468211 RPP38P78345 283 aaKnown RBP22.34■■□□□ 1.17
PTCH1-210ENST00000468211 NHSL2Q5HYW2 709 aa22.34■■□□□ 1.17
PTCH1-210ENST00000468211 LACC1Q8IV20 430 aa22.34■■□□□ 1.17
PTCH1-210ENST00000468211 FAM83FQ8NEG4 500 aaPredicted RBP22.34■■□□□ 1.17
PTCH1-210ENST00000468211 LCORQ96JN0 433 aaPredicted RBP22.34■■□□□ 1.17
PTCH1-210ENST00000468211 TMEM237Q96Q45 408 aa22.34■■□□□ 1.17
PTCH1-210ENST00000468211 LIME1Q9H400 295 aa22.34■■□□□ 1.17
PTCH1-210ENST00000468211 GALNT9Q9HCQ5 603 aa22.34■■□□□ 1.17
PTCH1-210ENST00000468211 ZFHX3Q15911 3703 aa22.33■■□□□ 1.17
PTCH1-210ENST00000468211 DLX3O60479 287 aa22.33■■□□□ 1.17
PTCH1-210ENST00000468211 ICOSLGO75144 302 aa22.33■■□□□ 1.17
PTCH1-210ENST00000468211 UGT2B11O75310 529 aa22.33■■□□□ 1.17
PTCH1-210ENST00000468211 SUPT7LO94864 414 aa22.33■■□□□ 1.17
PTCH1-210ENST00000468211 TIMP3P35625 211 aa22.33■■□□□ 1.17
PTCH1-210ENST00000468211 KIR2DL3P43628 341 aa22.33■■□□□ 1.17
PTCH1-210ENST00000468211 EMDP50402 254 aa22.33■■□□□ 1.17
PTCH1-210ENST00000468211 HTR6P50406 440 aa22.33■■□□□ 1.17
PTCH1-210ENST00000468211 IST1P53990 364 aa22.33■■□□□ 1.17
PTCH1-210ENST00000468211 RAE1P78406 368 aaKnown RBP22.33■■□□□ 1.17
PTCH1-210ENST00000468211 ZNF678Q5SXM1 525 aa22.33■■□□□ 1.17
PTCH1-210ENST00000468211 NUP54Q7Z3B4 507 aa22.33■■□□□ 1.17
PTCH1-210ENST00000468211 OR1J4Q8NGS1 313 aa22.33■■□□□ 1.17
PTCH1-210ENST00000468211 HSPBAP1Q96EW2 488 aa22.33■■□□□ 1.17
PTCH1-210ENST00000468211 GPATCH1Q9BRR8 931 aaKnown RBP22.33■■□□□ 1.17
PTCH1-210ENST00000468211 VPS29Q9UBQ0 182 aa22.33■■□□□ 1.17
PTCH1-210ENST00000468211 EXOC1LA0A1B0GW35 172 aa22.32■■□□□ 1.16
PTCH1-210ENST00000468211 DVL2O14641 736 aa22.32■■□□□ 1.16
PTCH1-210ENST00000468211 ASCL1P50553 236 aa22.32■■□□□ 1.16
PTCH1-210ENST00000468211 AGFG1P52594 562 aaKnown RBP22.32■■□□□ 1.16
PTCH1-210ENST00000468211 TRA2BP62995 288 aaKnown RBP22.32■■□□□ 1.16
PTCH1-210ENST00000468211 PLCXD2Q0VAA5 305 aa22.32■■□□□ 1.16
PTCH1-210ENST00000468211 NSUN5P2Q63ZY6 315 aa22.32■■□□□ 1.16
PTCH1-210ENST00000468211 TMEM81Q6P7N7 255 aa22.32■■□□□ 1.16
PTCH1-210ENST00000468211 TIFABQ6ZNK6 161 aa22.32■■□□□ 1.16
PTCH1-210ENST00000468211 MED12LQ86YW9 2145 aa22.32■■□□□ 1.16
PTCH1-210ENST00000468211 TRIB1Q96RU8 372 aa22.32■■□□□ 1.16
PTCH1-210ENST00000468211 EPB41L4BQ9H329 900 aa22.32■■□□□ 1.16
PTCH1-210ENST00000468211 SERHLQ9NQF3 203 aa22.32■■□□□ 1.16
PTCH1-210ENST00000468211 UTS2RQ9UKP6 389 aa22.32■■□□□ 1.16
PTCH1-210ENST00000468211 PSME2Q9UL46 239 aa22.32■■□□□ 1.16
PTCH1-210ENST00000468211 MAPRE3Q9UPY8 281 aa22.32■■□□□ 1.16
PTCH1-210ENST00000468211 CFL2Q9Y281 166 aa22.32■■□□□ 1.16
PTCH1-210ENST00000468211 ZNF469Q96JG9 3925 aaPredicted RBP22.31■■□□□ 1.16
PTCH1-210ENST00000468211 SNPHO15079 494 aa22.31■■□□□ 1.16
PTCH1-210ENST00000468211 IL3P08700 152 aa22.31■■□□□ 1.16
PTCH1-210ENST00000468211 CTAGE8P0CG41 777 aa22.31■■□□□ 1.16
PTCH1-210ENST00000468211 DRD5P21918 477 aa22.31■■□□□ 1.16
PTCH1-210ENST00000468211 PPICP45877 212 aa22.31■■□□□ 1.16
PTCH1-210ENST00000468211 FBXL19-AS1Q494R0 122 aa22.31■■□□□ 1.16
PTCH1-210ENST00000468211 ZNF628Q5EBL2 1059 aa22.31■■□□□ 1.16
PTCH1-210ENST00000468211 SLC30A6Q6NXT4 461 aa22.31■■□□□ 1.16
PTCH1-210ENST00000468211 CTAGE4Q8IX94 777 aa22.31■■□□□ 1.16
PTCH1-210ENST00000468211 PM20D2Q8IYS1 436 aa22.31■■□□□ 1.16
PTCH1-210ENST00000468211 CCDC116Q8IYX3 515 aa22.31■■□□□ 1.16
PTCH1-210ENST00000468211 WDSUB1Q8N9V3 476 aa22.31■■□□□ 1.16
PTCH1-210ENST00000468211 RNASE6Q93091 150 aaKnown RBP22.31■■□□□ 1.16
PTCH1-210ENST00000468211 ABTB1Q969K4 478 aaPredicted RBP22.31■■□□□ 1.16
PTCH1-210ENST00000468211 ZNF382Q96SR6 550 aa22.31■■□□□ 1.16
PTCH1-210ENST00000468211 FAIM2Q9BWQ8 316 aa22.31■■□□□ 1.16
PTCH1-210ENST00000468211 OSBPL11Q9BXB4 747 aa22.31■■□□□ 1.16
PTCH1-210ENST00000468211 POLDIP3Q9BY77 421 aaKnown RBP22.31■■□□□ 1.16
PTCH1-210ENST00000468211 ACPTQ9BZG2 426 aa22.31■■□□□ 1.16
PTCH1-210ENST00000468211 NMRK1Q9NWW6 199 aa22.31■■□□□ 1.16
PTCH1-210ENST00000468211 ZNF629Q9UEG4 869 aaPredicted RBP22.31■■□□□ 1.16
PTCH1-210ENST00000468211 MCM8Q9UJA3 840 aa22.31■■□□□ 1.16
PTCH1-210ENST00000468211 NFU1Q9UMS0 254 aa22.31■■□□□ 1.16
PTCH1-210ENST00000468211 DLGAP4Q9Y2H0 992 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms